- Genome Status
3D reconstructed images of the F-actin contractile ring
Did You Know ... ?
PomBase provides a motif search tool that queries S. pombe proteins for any user-defined amino acid sequence. The search supports exact match queries, wildcards, gaps, and ambiguity codes (specified on the motif search page). Motif search results can be pasted into the Gene List Search (part of the PomBase Advanced Search) to be combined with other queries such as GO, phenotype, protein length, etc.
Wednesday, 17th Sep, 2014
We have updated the data available on the PomBase web site to include manual curation through August 30, 2014. Community curation now covers over 200 papers.
Tuesday, 19th Aug, 2014
We have updated the data available on the PomBase web site to include manual curation through August 8, 2014. Community curation now covers over 190 papers. Gene pages now include links to the S. pombe PeptideAtlas, a database of peptides identified in tandem mass spectrometry proteomics experiments.
Friday, 18th Jul, 2014
We have updated the data available on the PomBase web site to include manual curation through July 8, 2014. The gene pages also now display protein modification data from an additional large-scale dataset:
Koch A, Krug K, Pengelley S, Macek B, Hauf S. 2011. Mitotic substrates of the kinase aurora with roles in chromatin regulation identified through quantitative phosphoproteomics of fission yeast. Sci Signal. 4(179): rs6 doi: 10.1126/scisignal.2001588 PMID:21712547
We have also made corrections to some residue positions affected by sequence updates in one of the modification datasets we added last month:
Carpy A, Krug K, Graf S, Koch A, Popic S, Hauf S, Macek B. 2014....