- Genome Status
Architectural Plan of S. pombe, Johanna Hoog and Claude Anthony
Did You Know ... ?
PomBase provides a motif search tool that queries S. pombe proteins for any user-defined amino acid sequence. The search supports exact match queries, wildcards, gaps, and ambiguity codes (specified on the motif search page). Motif search results can be pasted into the Gene List Search (part of the PomBase Advanced Search) to be combined with other queries such as GO, phenotype, protein length, etc.
Friday, 21st Feb, 2014
We have once again updated the data available on the PomBase web site. The data now includes manual curation through January 10, 2014, and covers over 100 papers that have been curated in Canto by community members. We again thank all who have contrubited curation via Canto.
We have made some improvements to the gene pages. Highlights:
- The Sequence section now has links to NCBI BLAST as well as Ensembl BLAST.
- The External References section now links to the Pomb(A) polyadenylation viewer.
In the genome browser, new data tracks are now available for data from these publications:
- Rhind N, [and many more]. 2011. Comparative functional genomics of the fission yeasts. Science 332(6032):930-6. doi: 10.1126/science.1203357....
Thursday, 20th Feb, 2014
We are about to release a data update for PomBase. Please note that there is still a problem with the human orthologs, as originally described on this list in mid-December (see archived message at http://listserver.ebi.ac.uk/pipermail/pombelist/2013/003926.html). We will correct this problem in the next PomBase release, and apologise for any inconvenience in the meantime.