Citing PomBase
To cite S. pombe genome data and annotation, please use:
Wood V, Harris MA, McDowall MD, Rutherford K, Vaughan BW, Staines DM, Aslett M, Lock A, Bähler J, Kersey PJ, Oliver SG.
PomBase: a comprehensive online resource for fission yeast.
Nucleic Acids Res. 2012 Jan;40(Database issue):D695-9. Epub 2011 Oct 28.
Genome Sequence
To cite the S. pombe genome sequence, use:
Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, Stewart A, Sgouros J, Peat N, Hayles J, Baker S, et al.
The genome sequence of Schizosaccharomyces pombe.
Nature. 2002 Feb 21;415(6874):871-80. Erratum in: Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L].
GO Annotations
To cite the S. pombe Gene Ontology annotation data, use the 2012 NAR Database Issue paper noted above.
(Note that GO annotation for S. pombe has also been previously published, but we now recommend the 2012 NAR paper as it is more up-to-date. Aslett M, Wood V. Gene Ontology annotation status of the fission yeast genome: preliminary coverage approaches 100%. Yeast 2006 Oct 15;23(13):913-9. Erratum in Yeast 2007 May;24(5):457. PMID:17072883)
Phenotype Ontology and Annotations
To cite the Fission Yeast Phenotype Ontology (FYPO) and/or S. pombe FYPO annotation data, use:
Harris MA, Lock A, Bähler J, Oliver SG, Wood V.
FYPO: The Fission Yeast Phenotype Ontology.
Bioinformatics. 2013 Epub ahead of print.
Full text (provisional PDF) at Bioinformatics
Genome Browser
To cite the S. pombe genome browser, use:
Kersey PJ, Staines DM, Lawson D, Kulesha E, Derwent P, Humphrey JC, Hughes DS, Keenan S, Kerhornou A, Koscielny G, Langridge N, McDowall MD, Megy K, Maheswari U, Nuhn M, Paulini M, Pedro H, Toneva I, Wilson D, Yates A, Birney E.
Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species.
Nucleic Acids Res. 2012 Jan;40(Database issue):D91-7. Epub 2011 Nov 8.
Compara
To cite the S. pombe Compara data, use:
Vilella AJ, Severin J, Ureta-Vidal A, Heng L, Durbin R, Birney E.
EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates.
Genome Res 2009 Feb;19(2):327-35. Epub 2008 Nov 24.