mug134 (SPAC10F6.16)

Gene Standard Namemug134 ChromosomeI
Systematic IDSPAC10F6.16 Gene Start1238896
Synonymsigo1 Gene End1240185
ProductmRNA stability protein Igo1 (predicted) Gene Length1290
Feature Typeprotein coding CDS Start1238896
Name DescriptionMeiotically Upregulated Gene CDS End1239424
Characterisation Statusbiological_role_inferred CDS Length529

Ensembl Gene Location
  1. SPAC10F6.13c
  2. SPNCRNA.726
  3. SPAC10F6.14c
  4. mrp1
  5. SPNCRNA.727
  6. snoZ16
  7. SPNCRNA.728
  8. SPAC10F6.15
  9. SPNCRNA.729
  10. SPNCRNA.432
  11. mug134
  12. SPAC10F6.17c
  13. alg13
  14. SPAC56E4.03
  15. cut6
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0001491viable vegetative cellMicroscopymug134delta (deletion)deletionPMID:20473289
GO Biological Process

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0048255mRNA stabilizationISOSGD:S000005101GO_REF:0000024
GO:0070314G1 to G0 transitionISOSGD:S000005101GO_REF:0000024
GO Cellular Component

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Term IDTerm NameEvidenceWith/FromReference
GO:0000932cytoplasmic mRNA processing bodyISOSGD:S000005101GO_REF:0000024
GO:0005634nucleusIDAPMID:16823372
ISOSGD:S000005101GO_REF:0000024
GO:0005737cytoplasmISOSGD:S000005101GO_REF:0000024
GO:0005829cytosolIDAPMID:16823372
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
112388961238979
212390251239108
312391731240185
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF04667 IPR006760 Pfam Endosulphine 25 86 1
PTHR10358:SF3 hmmpanther 2 113 1
PTHR10358 hmmpanther 2 113 1

View domain organization at Pfam

Protein Modifications (PSI-MOD)

Term IDTerm NameEvidenceResidueReference
MOD:00696phosphorylated residueevidenceInferred from Sequence or Structural Similarity

Protein Properties

Ave. residue weight 111.09 Da
Charge 8.50
Isoelectric point 10.33
Molecular weight 15.44 kDa
Number of residues 139
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
expressed during meiosis PMID:16303567
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide7280.95PMID:23101633
experimental evidencevegetative growth of a single-celled organismPECO:0000014,
PECO:0000005		population_wide9229.33PMID:23101633
RNA levelexperimental evidencevegetative growth of a single-celled organismPECO:0000014,
PECO:0000005		population_wide2.7PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.82PMID:23101633
Species Distribution
DescriptionQualifierReference
predominantly single copy (one to one)
conserved in fungi
conserved in eukaryotes
conserved in metazoa
conserved in vertebrates
conserved in eukaryotes only
Manually curated orthologous groups
SpeciesGeneDescription

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External References
Database Identifier Description
NBRP SPAC10F6.16 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC10F6.16 Retrieval of eukaryotic orthologs
BioGrid SPAC10F6.16 BioGRID Interaction Datasets
Bähler Lab SPAC10F6.16 Cell Cycle Expression Profile
Bähler Lab SPAC10F6.16 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC10F6.16 Pheromone response/mating expression profiles
Bähler Lab SPAC10F6.16 Environmental stress expression profiles
Bähler Lab SPAC10F6.16 Bähler Lab Transcriptome Viewer
Cyclebase SPAC10F6.16 Cell Cycle Data
PInt SPAC10F6.16 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPAC10F6.16 Entrez Gene
WikiGene2542961endosulphine family protein
EntrezGene2542961endosulphine family protein
SPD / RIKEN05/05D01Orfeome Localization Data
UniProtKB/SwissProtP79058Uncharacterized protein C10F6.16
ModBaseP79058Database of comparative protein structure models
Pfam Protein DomainsP79058Pfam Domain Arrangement
RefSeq PeptideNP_593267endosulphine family protein
RefSeq mRNANM_001018664972h- endosulphine family protein (mug134), mRNA
European Nucleotide ArchiveBAA19234ENA Protein Mapping
European Nucleotide ArchiveCAA15729ENA Protein Mapping
SPD / RIKEN05/05D01Orfeome Localization Data

Literature for mug134
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Search: UK PMC or PubMed

Release Version: PomBase:18.34 - 04 Apr 2013