SPAC1142.01

SynonymsSPAC17G6.18 ChromosomeI
ProductDUF654 family protein Gene Start3625312
Feature Typeprotein coding Gene End3627664
Name Description CDS Start3625574
Characterisation Statusconserved_unknown CDS End3627544

Ensembl Gene Location
SPAC17G6.15c ysh1 pof8 > SPAC1142.01 < SPNCRNA.922 SPAC1142.02c swi2 SPAC1142.04
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
136253123625507
236255553627664

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04910 Pfam Transcription factor 25 245 553 272.4 1


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residue
Temporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000288coiled-coilTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000288

Protein Properties

Ave. residue weight 114.35 Da
Charge -30.50
Isoelectric point 4.58
Molecular weight 75.02 kDa
Number of residues 656
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005737cytoplasmISS SGD:S000002741GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Warning

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DescriptionSourceAll Genes
gene structure updatedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
dsc4conserved fungal protein Negative Genetic
dsc1ubiquitin-protein ligase E3 (predicted) Negative Genetic


External References

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Database Identifier Description
NBRP SPAC1142.01 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC1142.01 Retrieval of eukaryotic orthologs
BioGrid SPAC1142.01 BioGRID Interaction Datasets
Bähler Lab SPAC1142.01 Cell Cycle Expression Profile
Bähler Lab SPAC1142.01 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC1142.01 Pheromone response/mating expression profiles
Bähler Lab SPAC1142.01 Environmental stress expression profiles
Bähler Lab SPAC1142.01 Bähler Lab Transcriptome Viewer
Cyclebase SPAC1142.01 Cell Cycle Data
Entrez Gene SPAC1142.01 Link to Entrez Gene
SPD / RIKEN46/46E07Orfeome Localization Data
UniProtKB/SwissProtO13796Uncharacterized protein C1142.01
ArrayExpressO13796Link to ArrayExpress
RefSeq PeptideNP_594265DUF654 family protein
RefSeq mRNANM_001019688972h- DUF654 family protein (SPAC1142.01), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB16229ENA Protein Mapping
UniParcUPI0001B06278UniProt Archive

Literature for SPAC1142.01

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Search: UK PMC or PubMed