mug132 (SPAC11G7.06c)


Gene Standard Namemug132 Characterisation Statusfission_yeast_specific_family
Systematic IDSPAC11G7.06c Feature Typeprotein coding
Synonyms Name Description
ProductS. pombe specific UPF0300 family protein 3 Product Size430aa, 50.43 kDa
Genomic Location Chromosome I, 3974699-3971564 (3136nt); CDS:3973234-3971942 (1293nt)

Ensembl Gene Location
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0005739mitochondrionIDAPMID:16823372756
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0000086sensitive to tacrolimusCell growth assaymug132ΔNullPECO:0000201, PECO:0000005, PECO:0000142PMID:2185027179
expressivity FYPO_EXT:0000001
FYPO:0002060viable vegetative cell populationMicroscopymug132ΔNullPMID:204732893755
Microscopymug132ΔNullPECO:0000005, PECO:0000137PMID:23697806

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002177viable vegetative cell with normal cell morphologyMicroscopymug132ΔNullPECO:0000005, PECO:0000137PMID:236978063078
penetrance FYPO_EXT:0000001
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
139746993971564

UTRs

Region Start End Reference
three_prime_UTR39719413971564PMID:21511999
five_prime_UTR39746993973235PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF08594 Pfam IPR013903 Meiotic expression up-regulated protein 152 364 6

View domain organization at Pfam

Protein Properties

Ave. residue weight 117.29 Da
Charge 23.00
Isoelectric point 9.44
Molecular weight 50.43 kDa
Number of residues 430
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
NDduring cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
NDduring GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
0.12during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
0.35during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
Orthologs

Orthologs in Compara


External References
Database Identifier Description
NBRP SPAC11G7.06c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC11G7.06c Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPAC11G7.06c BioGRID Interaction Datasets
Expression Viewer SPAC11G7.06c Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPAC11G7.06c Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPAC11G7.06c Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPAC11G7.06c Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPAC11G7.06c Polyadenylation Viewer (Gullerova lab)
pombeTV SPAC11G7.06c Transcriptome Viewer (Bähler Lab)
Cyclebase SPAC11G7.06c Cell Cycle Data
GEO SPAC11G7.06c GEO profiles
PInt SPAC11G7.06c Protein-Protein Interaction Predictor (Bähler Lab)
WikiGene2543018hypothetical protein
EntrezGene2543018hypothetical protein
SPD / RIKEN22/22D10Orfeome Localization Data
UniProtKB/SwissProtO13699Meiotically up-regulated gene 132 protein
ModBaseO13699Database of comparative protein structure models
StringO13699Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_594400hypothetical protein SPAC11G7.06c
RefSeq mRNANM_001019823972h- hypothetical protein (mug132), mRNA
European Nucleotide ArchiveCAB16211ENA Protein Mapping
UniParcUPI000006A62EUniProt Archive

Literature for mug132

Search: Europe PMC or PubMed

Release Version: PomBase:21_41 - 24 Feb 2014