SPAC12G12.11c

Synonyms ChromosomeI
ProductDUF544 family protein Gene Start326440
Feature Typeprotein coding Gene End328122
Name Description CDS Start326694
Characterisation Statusconserved_unknown CDS End327982

Ensembl Gene Location
pfs2 cid14 SPNCRNA.638 SPAC12G12.12 > SPAC12G12.11c < wdr21 SPAC12G12.09 SPAC12G12.17 mrpl6 SPAC12G12.07c
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1326440326856
2326942327391
3327498328122

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04424 Pfam Protein of unknown function DUF544 66 176 98.7 1

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000288coiled-coilTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000288

Protein Properties

Ave. residue weight 115.84 Da
Charge -6.00
Isoelectric point 5.37
Molecular weight 42.28 kDa
Number of residues 365
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005515protein bindingIPI sad1Temporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005515

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Physical Interactions from BioGRID

Gene Feature Evidence Source
sad1spindle pole body protein Sad1 Two-hybrid

External References

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Database Identifier Description
NBRP SPAC12G12.11c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC12G12.11c Retrieval of eukaryotic orthologs
BioGrid SPAC12G12.11c BioGRID Interaction Datasets
Bähler Lab SPAC12G12.11c Cell Cycle Expression Profile
Bähler Lab SPAC12G12.11c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC12G12.11c Pheromone response/mating expression profiles
Bähler Lab SPAC12G12.11c Environmental stress expression profiles
Bähler Lab SPAC12G12.11c Bähler Lab Transcriptome Viewer
Cyclebase SPAC12G12.11c Cell Cycle Data
Entrez Gene SPAC12G12.11c Link to Entrez Gene
SPD / RIKEN22/22C12Orfeome Localization Data
UniProtKB/SwissProtQ09874Uncharacterized protein C12G12.11c
ArrayExpressQ09874Link to ArrayExpress
RefSeq PeptideNP_592887DUF544 family protein
RefSeq mRNANM_001018287972h- DUF544 family protein (SPAC12G12.11c), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAA91506ENA Protein Mapping
UniParcUPI000013A0A0UniProt Archive

Literature for SPAC12G12.11c

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Search: UK PMC or PubMed