erg11 (SPAC13A11.02c)


Gene Standard Nameerg11 Characterisation Statusbiological_role_inferred
Systematic IDSPAC13A11.02c Feature Typeprotein coding
Synonymscyp51 Name Description
Productsterol 14-demethylase Erg11 (predicted) Product Size495aa, 56.33 kDa
Genomic Location Chromosome I, 577171-574652 (2520nt); CDS:576622-575135 (1488nt)

Ensembl Gene Location
GO Molecular Function
Term NameCount
metal ion binding747
Annotation ExtensionEvidenceWith/FromReference
protein binding831
Annotation ExtensionEvidenceWith/FromReference
sterol 14-demethylase activity1
Annotation ExtensionEvidenceWith/FromReference
GO Biological Process
Term NameCount
demethylation13
Annotation ExtensionEvidenceWith/FromReference
ergosterol biosynthetic process44
Annotation ExtensionEvidenceWith/FromReference
GO Cellular Component
Term NameCount
endoplasmic reticulum594
Annotation ExtensionEvidenceWith/FromReference
endoplasmic reticulum membrane205
Annotation ExtensionEvidenceWith/FromReference
integral component of membrane1018
Annotation ExtensionEvidenceWith/FromReference
Fission Yeast Phenotype Ontology
Gene Deletion Viability: Inviable

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002061inviable vegetative cell populationMicroscopyerg11ΔNullPECO:0000005, PECO:0000137PMID:236978061338
Microscopyerg11ΔNullPMID:20473289

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0001991inviable after spore germination, without cell division474
penetrance FYPO_EXT:0000001Microscopyerg11ΔNullPECO:0000005, PECO:0000137PMID:23697806
FYPO:0001511inviable vegetative cell, abnormal cell shape, normal cell size199
penetrance FYPO_EXT:0000003Microscopyerg11ΔNullPECO:0000005, PECO:0000137PMID:23697806
Target Of
OntologyRelationshipGeneProductReference
GO regulated by sre1 sterol regulatory element binding protein, transcription factor Sre1 PMID:16537923
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1577171574652

UTRs

Region Coordinates Reference
five_prime_UTR577171..576623PMID:21511999
three_prime_UTR575134..574652PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00067 Pfam IPR001128 Cytochrome P450 37 489 2
TMhelix TMHMM 5 22 959
TMhelix TMHMM 35 57 959
PS00086 Prosite Patterns IPR017972 Cytochrome P450, conserved site 435 444 2
PTHR24286 HMMPANTHER 1 495 2
PTHR24286:SF4 HMMPANTHER 1 495 1
1.10.630.10 Gene3D IPR001128 Cytochrome P450 32 495 2
SSF48264 SuperFamily IPR001128 Cytochrome P450 29 494 2
PR00465 PRINTS IPR002403 Cytochrome P450, E-class, group IV 336 352 1
PR00465 PRINTS IPR002403 Cytochrome P450, E-class, group IV 55 78 1
PR00465 PRINTS IPR002403 Cytochrome P450, E-class, group IV 442 460 1
PR00465 PRINTS IPR002403 Cytochrome P450, E-class, group IV 387 405 1
PR00465 PRINTS IPR002403 Cytochrome P450, E-class, group IV 371 385 1
PR00465 PRINTS IPR002403 Cytochrome P450, E-class, group IV 279 305 1
PR00465 PRINTS IPR002403 Cytochrome P450, E-class, group IV 426 442 1
PR00465 PRINTS IPR002403 Cytochrome P450, E-class, group IV 33 50 1
PR00385 PRINTS IPR001128 Cytochrome P450 288 305 2
PR00385 PRINTS IPR001128 Cytochrome P450 341 352 2
PR00385 PRINTS IPR001128 Cytochrome P450 433 442 2
PR00385 PRINTS IPR001128 Cytochrome P450 442 453 2

View domain organization at Pfam

Sequence Ontology

Term IDTerm NameReferenceCount
SO:0001812transmembrane_helix465

Protein Properties

Ave. residue weight 113.80 Da
Charge 13.50
Isoelectric point 9.03
Molecular weight 56.33 kDa
Number of residues 495
Modifications

Protein Modifications

Term IDTerm NameEvidenceResidueReferenceCount
MOD:00046O-phospho-L-serineIDAS430PMID:182575171670
present during cellular response to thiabendazole
present during cellular response to thiabendazoleIDAS138PMID:18257517
MOD:00696phosphorylated residueNASPMID:182575171922
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
95168during GO:0000080PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
91324during GO:0000084PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
101432during GO:0000085PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
85830during GO:0000087PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
92035during GO:0072690PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
31313.1during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
10512.65during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
23during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
3.1during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
Disease Association
DescriptionQualifierReferenceCount
cholesterinosis1
Species Distribution
DescriptionQualifierReferenceCount
predominantly single copy (one to one)3092
conserved in fungi4600
conserved in eukaryotes4514
conserved in metazoa3425
conserved in vertebrates3400
conserved in eukaryotes only2497
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Physical Interactions

Source: BioGRID

View all interactions in esyN
View the HCPIN interactions in esyN

Gene Product Evidence Reference
hhp1serine/threonine protein kinase Hhp1 Affinity Capture-MSPMID:24055157
hhp2serine/threonine protein kinase Hhp2 Affinity Capture-MSPMID:24055157
prp19ubiquitin-protein ligase E4 Affinity Capture-MSPMID:21386897
tea1cell end marker Tea1 Affinity Capture-MSPMID:21652630
cwf2RNA-binding protein Cwf2 Affinity Capture-MSPMID:21386897
External References
Database Identifier Description
NBRP SPAC13A11.02c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC13A11.02c Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPAC13A11.02c BioGRID Interaction Datasets
Expression Viewer SPAC13A11.02c Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPAC13A11.02c Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPAC13A11.02c Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPAC13A11.02c Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPAC13A11.02c Polyadenylation Viewer (Gullerova lab)
pombeTV SPAC13A11.02c Transcriptome Viewer (Bähler Lab)
Cyclebase SPAC13A11.02c Cell Cycle Data
GEO SPAC13A11.02c GEO profiles
PInt SPAC13A11.02c Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPAC13A11.02c Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPAC13A11.02c Fission yeast phenotypic data & analysis
SPD / RIKEN24/24A02Orfeome Localization Data
IntEnz1.14.13.70Integrated relational Enzyme database
Rhea1.14.13.70Annotated reactions database
UniProtKB/SwissProtQ09736Lanosterol 14-alpha demethylase erg11
ModBaseQ09736Database of comparative protein structure models
STRINGQ09736Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_592990sterol 14-demethylase (predicted)
RefSeq mRNANM_001018389972h- sterol 14-demethylase (predicted) (erg11), mRNA
European Nucleotide ArchiveCAA90803.1ENA Protein Mapping
UniParcUPI00001281EFUniProt Archive

Literature for erg11

Search: Europe PMC or PubMed

Release Version: PomBase:23_47 - 27 Oct 2014