| Gene | Feature | Evidence | Source |
| srs2 | ATP-dependent DNA helicase, UvrD subfamily | Negative Genetic | |
| SPBC16A3.08c | Stm1 homolog (predicted) | Negative Genetic | |
| cip1 | RNA-binding protein Cip1 | Negative Genetic | |
| SPAC3H8.02 | sec14 cytosolic factor family phosphatidylinositol transporter (predicted) | Negative Genetic | |
| SPAC2H10.01 | transcription factor, zf-fungal binuclear cluster type (predicted) | Negative Genetic | |
| SPAC823.10c | mitochondrial carrier with solute carrier repeats (predicted) | Negative Genetic | |
| ctu1 | cytosolic thiouridylase subunit Ctu1 | Positive Genetic | |
| but2 | But2 family protein But2 | Positive Genetic | |
| SPCC965.10 | transcription factor (predicted) | Positive Genetic | |
| fsv1 | SNARE Fsv1 | Negative Genetic | |
| pmm1 | phosphomannomutase Pmm1 | Negative Genetic | |
| fio1 | iron transport multicopper oxidase Fio1 | Negative Genetic | |
| tpp1 | trehalose-6-phosphate phosphatase Tpp1 | Negative Genetic | |
| tip1 | CLIP170 family protein Tip1 | Negative Genetic | |
| SPBC1198.08 | dipeptidase Dug1 (predicted) | Negative Genetic | |
| SPCC1183.11 | MS ion channel protein 1 (predicted) | Negative Genetic | |
| psh3 | ER chaperone SHR3 homologue Psh3 | Positive Genetic | |
| mus7 | DNA repair protein Mus7/Mms22 | Negative Genetic | |
| atp11 | F1-ATPase chaperone Atp11 (predicted) | Negative Genetic | |
| fep1 | iron-sensing transcription factor Fep1 | Negative Genetic | |
| SPCC622.04 | dubious | Positive Genetic | |
| nap1 | nucleosome assembly protein Nap1 | Negative Genetic | |
| SPBPB7E8.01 | sequence orphan | Negative Genetic | |
| vps25 | ESCRT II complex subunit Vps25 | Negative Genetic | |
| SPAC12B10.04 | tubulin-tyrosine ligase (predicted) | Negative Genetic | |
| ura3 | dihydroorotate dehydrogenase Ura3 | Negative Genetic | |
| apl1 | AP-2 adaptor complex subunit Apl1 (predicted) | Positive Genetic | |
| SPBC17A3.06 | phosphoprotein phosphatase (predicted) | Negative Genetic | |
| rpl1202 | 60S ribosomal protein L12.1/L12A | Negative Genetic | |
| SPAC1F12.03c | cytochrome C oxidase transmembrane region | Negative Genetic | |
| gdh1 | NADP-specific glutamate dehydrogenase Gdh1 (predicted) | Negative Genetic | |
| pyp2 | tyrosine phosphatase Pyp2 | Negative Genetic | |
| SPAPB1A10.14 | F-box protein (predicted) | Negative Genetic | |
| rpl4302 | 60S ribosomal protein L37a (predicted) | Negative Genetic | |
| eng2 | endo-1,3-beta-glucanase Eng2 | Positive Genetic | |
| gld1 | mitochondrial glycerol dehydrogenase Gld1 | Negative Genetic | |
| SPAC977.17 | MIP water channel (predicted) | Negative Genetic | |
| swd3 | WD repeat protein Swd3 | Negative Genetic | |
| spp27 | RNA polymerase I upstream activation factor complex subunit Spp27 | Negative Genetic | |
| SPAC17H9.08 | mitochondrial coenzyme A transporter (predicted) | Positive Genetic | |
| raf2 | Rik1-associated factor Raf2 | Negative Genetic | |
| qcr8 | ubiquinol-cytochrome-c reductase complex subunit 7 | Negative Genetic | |
| plc1 | phosphoinositide phospholipase C Plc1 | Negative Genetic | |
| ef1a-a | translation elongation factor EF-1 alpha Ef1a-a | Negative Genetic | |
| atp12 | F1-ATPase chaperone Atp12 (predicted) | Negative Genetic | |
| SPAC19A8.03 | phosphatidylinositol-3-phosphatase, myotubularin family (predicted) | Negative Genetic | |
| rpl4101 | 60S ribosomal protein L41 | Negative Genetic | |
| ppr8 | mitochondrial PPR repeat protein Ppr8 | Negative Genetic | |
| rpl1601 | 60S ribosomal protein L13/L16 (predicted) | Negative Genetic | |
| SPAC212.06c | DNA helicase in rearranged telomeric region, truncated | Negative Genetic | |
| SPBC1271.14 | glutamate N-acetyltransferase (predicted) | Negative Genetic | |
| SPBC21B10.08c | sequence orphan | Negative Genetic | |
| SPBC1348.01 | S. pombe specific DUF999 protein family 5 | Negative Genetic | |
| cmk1 | calcium/calmodulin-dependent protein kinase Cmk1 | Negative Genetic | |
| lag1 | sphingosine N-acyltransferase Lag1 | Negative Genetic | |
| iqw1 | WD repeat protein, Iqw1 | Positive Genetic | |
| SPCC1442.02 | central kinetochore associated family protein (predicted) | Negative Genetic | |
| SPAC27D7.02c | GRIP domain protein (predicted) | Negative Genetic | |
| nse6 | Smc5-6 complex non-SMC subunit Nse6 | Positive Genetic | |
| SPAC4H3.12c | dubious | Negative Genetic | |
| sib1 | ferrichrome synthetase Sib1 | Positive Genetic | |
| SPBC9B6.03 | zf-FYVE type zinc finger protein | Negative Genetic | |
| ura5 | orotate phosphoribosyltransferase Ura5 | Positive Genetic | |
| SPCC794.01c | glucose-6-phosphate 1-dehydrogenase (predicted) | Negative Genetic | |
| bun107 | WD repeat protein, human WDR48 family Bun107 | Negative Genetic | |
| SPCC162.06c | vacuolar sorting protein Vps60 (predicted) | Negative Genetic | |
| mrt4 | mRNA turnover and ribosome assembly protein Mrt4 (predicted) | Negative Genetic | |
| SPBC19G7.04 | HMG box protein | Positive Genetic | |
| meu29 | sequence orphan | Negative Genetic | |
| asl1 | cell wall protein Asl1, predicted O-glucosyl hydrolase | Negative Genetic | |
| cbp1 | CENP-B homolog | Positive Genetic | |
| arg3 | ornithine carbamoyltransferase Arg3 | Negative Genetic | |
| mug121 | sequence orphan | Negative Genetic | |
| SPCC550.07 | acetamidase (predicted) | Positive Genetic | |
| SPAC2F7.17 | mitochondrial peptide chain release factor (predicted) | Positive Genetic | |
| SPCC285.10c | SPRY domain protein | Negative Genetic | |
| SPBC56F2.08c | RNA-binding protein (predicted) | Negative Genetic | |
| pds5 | cohesin-associated protein Pds5 | Positive Genetic | |
| SPAC23H4.16c | sequence orphan | Positive Genetic | |
| SPAC750.08c | NAD-dependent malic enzyme (predicted), partial | Negative Genetic | |
| SPBC582.10c | ATP-dependent DNA helicase Rhp16b (predicted) | Negative Genetic | |
| SPAC24B11.09 | mitochondrial protein, predicted, human BRP44 ortholog | Negative Genetic | |
| SPAC9G1.07 | sequence orphan | Negative Genetic | |
| erf2 | palmitoyltransferase Erf2 (predicted) | Positive Genetic | |
| est1 | telomerase regulator Est1 | Negative Genetic | |
| SPBC12C2.03c | methionine synthase reductase (predicted) | Negative Genetic | |
| SPBC21B10.07 | glycosyl hydrolase family 16 (predicted) | Negative Genetic | |
| akr1 | palmitoyltransferase Akr1 (predicted) | Positive Genetic | |
| SPAC3A12.06c | sodium/calcium exchanger (predicted) | Negative Genetic | |
| nep2 | NEDD8 protease Nep2 | Negative Genetic | |
| SPAC11D3.15 | 5-oxoprolinase (ATP-hydrolizing) (predicted) | Negative Genetic | |
| SPAC12B10.10 | sequence orphan | Negative Genetic | |
| SPBC27B12.11c | transcription factor (predicted) | Negative Genetic | |
| nup124 | nucleoporin Nup124 | Negative Genetic | |
| spn3 | septin Spn3 | Negative Genetic | |
| SPAC977.05c | conserved fungal family | Negative Genetic | |
| chs2 | chitin synthase homolog Chs2 | Positive Genetic | |
| lsg1 | Lsk1 complex gamma subunit (predicted) | Positive Genetic | |
| SPBC1861.05 | carbohydrate kinase (predicted) | Positive Genetic | |
| SPBC13A2.04c | PTR family peptide transporter (predicted) | Negative Genetic | |
| arg6 | acetylglutamate synthase Arg6 (predicted) | Negative Genetic | |
| SPAC10F6.04 | RCC domain protein Ats1 (predicted) | Positive Genetic | |
| SPBP35G2.14 | RNA-binding protein | Negative Genetic | |
| did4 | ESCRT III complex subunit Did4 | Negative Genetic | |
| bun62 | WD repeat protein, human WDR20 family, Bun62 | Negative Genetic | |
| SPCC1235.01 | sequence orphan | Negative Genetic | |
| trx2 | mitochondrial thioredoxin Trx2 | Negative Genetic | |
| egd2 | nascent polypeptide-associated complex alpha subunit Egd2 | Positive Genetic | |
| rtf1 | replication termination factor Rtf1 | Negative Genetic | |
| SPAC212.01c | S. pombe specific DUF999 family protein 2 | Negative Genetic | |
| are2 | acyl-coA-sterol acyltransferase Are2 (predicted) | Positive Genetic | |
| gal1 | galactokinase Gal1 | Negative Genetic | |
| nop16 | ribosome biogenesis protein Nop16 (predicted) | Negative Genetic | |
| alg5 | dolichyl-phosphate beta-glucosyltransferase Alg5 (predicted) | Negative Genetic | |
| SPCC663.15c | conserved fungal protein | Negative Genetic | |
| mak10 | NatC N-acetyltransferase complex subunit Mak10 (predicted) | Positive Genetic | |
| sst4 | sorting receptor for ubiquitinated membrane proteins, ESCRT 0 complex subunit Sst4 | Negative Genetic | |
| SPBC119.12 | Golgi matrix protein (predicted) | Negative Genetic | |
| sft2 | Golgi transport protein Sft2 (predicted) | Negative Genetic | |
| ubp8 | SAGA complex ubiquitin C-terminal hydrolase Ubp8 | Negative Genetic | |
| SPAPB21F2.02 | Dopey family protein (predicted) | Negative Genetic | |
| zfs1 | CCCH tandem zinc finger protein, human Tristetraprolin homolog Zfs1, involved in mRNA catabolism | Negative Genetic | |
| SPAC1039.02 | phosphoprotein phosphatase (predicted) | Negative Genetic | |
| ght6 | hexose transporter Ght6 | Negative Genetic | |
| mex67 | mRNA export receptor, Tap, nucleoporin Mex67 | Negative Genetic | |
| apt1 | adenine phosphoribosyltransferase (APRT) (predicted) | Negative Genetic | |
| SPAC4H3.04c | UPF0103 family | Negative Genetic | |
| SPAC922.05c | membrane transporter (predicted) | Negative Genetic | |
| cph1 | Clr6 histone deacetylase associated PHD protein-1 Cph1 | Negative Genetic | |
| SPAC26H5.07c | seven transmembrane receptor protein (predicted) | Negative Genetic | |
| mac1 | membrane anchored protein Mac1 | Negative Genetic | |
| pnu1 | mitochondrial endodeoxyribonuclease Pnu1 | Negative Genetic | |
| mug170 | arrestin | Negative Genetic | |
| SPAC1399.04c | uracil phosphoribosyltransferase (predicted) | Negative Genetic | |
| scs7 | sphingosine hydroxylase Scs7 | Positive Genetic | |
| rpl1002 | 60S ribosomal protein L10 | Negative Genetic | |
| agn1 | glucan endo-1,3-alpha-glucosidase Agn1 | Negative Genetic | |
| SPCC1235.11 | mitochondrial protein, human BRP44L ortholog | Negative Genetic | |
| SPBC29A10.16c | cytochrome b5 (predicted) | Positive Genetic | |
| sum2 | G2/M transition checkpoint protein Sum2 | Negative Genetic | |
| pit1 | serine/threonine protein kinase, meiotic Pit1 | Negative Genetic | |
| vps20 | ESCRT III complex subunit Vps20 | Negative Genetic | |
| srb11 | cyclin CycC, Srb mediator subunit Srb11 | Negative Genetic | |
| SPAC694.04c | conserved eukaryotic protein | Positive Genetic | |
| SPBC23G7.13c | urea transporter (predicted) | Negative Genetic | |
| arg11 | N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase | Negative Genetic | |
| SPBC3E7.05c | human mitofilin ortholog (predicted) | Positive Genetic | |
| SPAC1687.21 | phosphoglycerate mutase family (predicted) | Positive Genetic | |
| sgf73 | SAGA complex subunit Sgf73 | Negative Genetic | |
| otu2 | ubiquitin specific cysteine protease, OTU family, Otu2 | Negative Genetic | |
| SPCC1795.10c | Sed5 Vesicle Protein Svp26 (predicted) | Negative Genetic | |
| SPAC750.01 | aldo/keto reductase family protein | Negative Genetic | |
| SPAC3C7.02c | protein kinase inhibitor associated with endocytosis (predicted) | Negative Genetic | |
| rik1 | silencing protein Rik1 | Negative Genetic | |
| oca2 | serine/threonine protein kinase Oca2 | Negative Genetic | |
| SPCC4B3.02c | Golgi transport protein Got1 (predicted) | Negative Genetic | |
| SPCC126.09 | vacuolar membrane zinc transporter (predicted) | Negative Genetic | |
| ccr1 | NADPH-cytochrome p450 reductase | Negative Genetic | |
| cuf1 | nutritional copper sensing transcription factor Cuf1 | Positive Genetic | |
| mfr1 | fizzy-related protein Mfr1 | Negative Genetic | |
| mei2 | RNA-binding protein involved in meiosis Mei2 | Negative Genetic | |
| cnt5 | Centaurin 5 | Negative Genetic | |
| ssa1 | heat shock protein Ssa1 (predicted) | Negative Genetic | |
| SPAC1A6.03c | phospholipase (predicted) | Negative Genetic | |
| SPCC550.11 | karyopherin (predicted) | Negative Genetic | |
| btf3 | nascent polypeptide-associated complex beta subunit | Negative Genetic | |
| rds1 | conserved fungal protein | Negative Genetic | |
| SPAC22H10.04 | protein phosphatase type 2A (predicted) | Negative Genetic | |