mde6 (SPAC15A10.10)

Synonyms ChromosomeI
ProductMuskelin homolog (predicted) Gene Start3696549
Feature Typeprotein coding Gene End3700027
Name Description CDS Start3697508
Characterisation Statusbiological_role_inferred CDS End3699837

Ensembl Gene Location
SPAC15A10.06 SPAC15A10.07 SPNCRNA.927 ain1 SPAC15A10.09c > mde6 < SPNCRNA.928 meu16 SPATRNACYS.03 SPATRNAPHE.01 ubr11
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
136965493697752
236977953698368
336984213698527
436985703699310
536993593699538
636995823700027

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF07646 Pfam Kelch repeat type 2 315 366 26.9 2
PF06588 Pfam Muskelin, N-terminal 2 206 326.4 1
PF07646 Pfam Kelch repeat type 2 262 302 24.3 2
50965 Superfamily 250 595 102.5 2

Protein Properties

Ave. residue weight 116.66 Da
Charge 10.00
Isoelectric point 7.18
Molecular weight 81.66 kDa
Number of residues 700
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viable
Temporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0045132meiotic chromosome segregationIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0045132

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005737cytoplasmIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737

Gene Expression

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DescriptionSourceAll Genes
antisense transcript detectedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000359
transcriptionally regulated by Mei4Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000546

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

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DescriptionSourceAll Genes
kelch repeat proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0001938

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
dsc4conserved fungal protein Negative Genetic


External References

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Database Identifier Description
NBRP SPAC15A10.10 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC15A10.10 Retrieval of eukaryotic orthologs
BioGrid SPAC15A10.10 BioGRID Interaction Datasets
Bähler Lab SPAC15A10.10 Cell Cycle Expression Profile
Bähler Lab SPAC15A10.10 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC15A10.10 Pheromone response/mating expression profiles
Bähler Lab SPAC15A10.10 Environmental stress expression profiles
Bähler Lab SPAC15A10.10 Bähler Lab Transcriptome Viewer
Cyclebase SPAC15A10.10 Cell Cycle Data
Entrez Gene SPAC15A10.10 Link to Entrez Gene
SPD / RIKEN28/28D04Orfeome Localization Data
UniProtKB/SwissProtO13730Mei4-dependent protein 6
ArrayExpressO13730Link to ArrayExpress
RefSeq PeptideNP_594297muskelin
RefSeq mRNANM_001019720972h- muskelin (mde6), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB10107ENA Protein Mapping
UniParcUPI0001B06288UniProt Archive

Literature for mde6

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Search: UK PMC or PubMed