SPAC15A10.12c

Synonyms ChromosomeI
ProductTRAPP complex subunit 2-like (predicted) Gene Start3710234
Feature Typeprotein coding Gene End3708974
Name Description CDS Start3709804
Characterisation Statusbiological_role_inferred CDS End3709206

Ensembl Gene Location
ubr11 > SPAC15A10.12c < ppk3 SPATRNAVAL.04 SPNCRNA.929 SPNCRNA.229 SPNCRNA.930 sgo2 bud6
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
137102343709499
237093463708974

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04628 Pfam Sedlin 11 142 72.4 2
64356 Superfamily 3 145 72.3 15

Protein Properties

Ave. residue weight 115.78 Da
Charge -2.50
Isoelectric point 5.59
Molecular weight 17.13 kDa
Number of residues 148
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006888ER to Golgi vesicle-mediated transportISS PFAM:PF04628GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006888

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005794Golgi apparatusISS SGD:S000000774GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005794
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Disease Association

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DescriptionSourceAll Genes
X-linked spondyloepiphyseal dysplasia tardaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0002189

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAC15A10.12c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC15A10.12c Retrieval of eukaryotic orthologs
BioGrid SPAC15A10.12c BioGRID Interaction Datasets
Bähler Lab SPAC15A10.12c Cell Cycle Expression Profile
Bähler Lab SPAC15A10.12c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC15A10.12c Pheromone response/mating expression profiles
Bähler Lab SPAC15A10.12c Environmental stress expression profiles
Bähler Lab SPAC15A10.12c Bähler Lab Transcriptome Viewer
Cyclebase SPAC15A10.12c Cell Cycle Data
Entrez Gene SPAC15A10.12c Link to Entrez Gene
SPD / RIKEN02/02C09Orfeome Localization Data
UniProtKB/SwissProtO13732Uncharacterized protein C15A10.12c
ArrayExpressO13732Link to ArrayExpress
RefSeq PeptideNP_594299TRAPP complex subunit subunit2-like (predicted)
RefSeq mRNANM_001019722972h- TRAPP complex subunit subunit2-like (predicted) (SPAC15A10.12c), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB10109ENA Protein Mapping
UniParcUPI0001B06289UniProt Archive

Literature for SPAC15A10.12c

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Search: UK PMC or PubMed