SPAC1639.01c

SynonymsSPAC806.09c ChromosomeI
ProductGNS1/SUR4 family protein (predicted) Gene Start254600
Feature Typeprotein coding Gene End251173
Name Description CDS Start253714
Characterisation Statusbiological_role_inferred CDS End251726

Ensembl Gene Location
SPAC806.06c SPAC806.05 SPNCRNA.629 ndk1 mod21 > SPAC1639.01c < SPNCRNA.630 trk2 SPNCRNA.631 tra2
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1254600253590
2252752252392
3252337251173

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF01151 Pfam GNS1/SUR4 membrane protein 71 307 191.4 2
TMHMM tmhmm Double transmembrane domain 69 89 0.99755 1312
TMHMM tmhmm Double transmembrane domain 109 128 0.99448 1312
TMHMM tmhmm Double transmembrane domain 151 173 0.97341 1312
TMHMM tmhmm Double transmembrane domain 203 223 0.96262 1312
TMHMM tmhmm Double transmembrane domain 240 258 0.91325 1312
TMHMM tmhmm Double transmembrane domain 278 299 0.99867 1312

Protein Properties

Ave. residue weight 113.81 Da
Charge 27.00
Isoelectric point 9.97
Molecular weight 41.54 kDa
Number of residues 365
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

 Contact Curators | Back to Top
Biological Process
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0019368fatty acid elongation, unsaturated fatty acidISS SGD:S000004364GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0019368
GO:0030148sphingolipid biosynthetic processISS SGD:S000004364GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030148

Cellular Component
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005789endoplasmic reticulum membraneISS SGD:S000004364GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005789
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829
GO:0030176integral to endoplasmic reticulum membraneISSGO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030176

Molecular Function
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0009922fatty acid elongase activityISS SGD:S000004364GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0009922

Warning

 Contact Curators | Back to Top
DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)] Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

 Contact Curators | Back to Top
SpeciesGeneDescription


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPAC1639.01c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC1639.01c Retrieval of eukaryotic orthologs
BioGrid SPAC1639.01c BioGRID Interaction Datasets
Bähler Lab SPAC1639.01c Cell Cycle Expression Profile
Bähler Lab SPAC1639.01c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC1639.01c Pheromone response/mating expression profiles
Bähler Lab SPAC1639.01c Environmental stress expression profiles
Bähler Lab SPAC1639.01c Bähler Lab Transcriptome Viewer
Cyclebase SPAC1639.01c Cell Cycle Data
Entrez Gene SPAC1639.01c Link to Entrez Gene
SPD / RIKEN19/19F03Orfeome Localization Data
UniProtKB/SwissProtQ7LKX0Putative elongation of fatty acids protein 2
ArrayExpressQ7LKX0Link to ArrayExpress
RefSeq PeptideNP_592859GNS1/SUR4 family protein
RefSeq mRNANM_001018260972h- GNS1/SUR4 family protein (SPAC1639.01c), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB55288ENA Protein Mapping
UniParcUPI000228F444UniProt Archive

Literature for SPAC1639.01c

 Contact Curators | Back to Top
Search: UK PMC or PubMed