gpi18 (SPAC18B11.05)

Synonyms ChromosomeI
Productpig-V, dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase (predicted) Gene Start310034
Feature Typeprotein coding Gene End308138
Name Description CDS Start309806
Characterisation Statusbiological_role_inferred CDS End308381

Ensembl Gene Location
tup11 SPAC18B11.09c SPAC18B11.08c rhp6 SPAC18B11.06 > gpi18 < ncs1 SPAC18B11.03c SPNCRNA.636 SPAC18B11.02c SPAC12G12.16c
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1310034309889
2309839309751
3309719308138

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04188 Pfam GPI mannosyltransferase 2-like 63 464 502.4 1
TMHMM tmhmm Double transmembrane domain 71 96 0.88179 1312
TMHMM tmhmm Double transmembrane domain 168 190 0.9971 1312
TMHMM tmhmm Double transmembrane domain 218 239 0.9742 1312
TMHMM tmhmm Double transmembrane domain 249 268 0.88807 1312
TMHMM tmhmm Double transmembrane domain 290 310 0.89209 1312
TMHMM tmhmm Double transmembrane domain 356 376 0.9969 1312
TMHMM tmhmm Double transmembrane domain 390 409 0.63657 1312
TMHMM tmhmm Double transmembrane domain 441 461 0.99333 1312

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000073protein transmembrane helicesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000073
SO:0000065protein N-terminal signal sequenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000065

Protein Properties

Ave. residue weight 115.53 Da
Charge 33.00
Isoelectric point 9.83
Molecular weight 53.61 kDa
Number of residues 464
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006506GPI anchor biosynthetic processISS SGD:S000000208GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006506

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005783endoplasmic reticulumIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005783
GO:0030176integral to endoplasmic reticulum membraneISS SGD:S000000208GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030176

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0004584dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activityISS SGD:S000000208GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0004584

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAC18B11.05 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC18B11.05 Retrieval of eukaryotic orthologs
BioGrid SPAC18B11.05 BioGRID Interaction Datasets
Bähler Lab SPAC18B11.05 Cell Cycle Expression Profile
Bähler Lab SPAC18B11.05 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC18B11.05 Pheromone response/mating expression profiles
Bähler Lab SPAC18B11.05 Environmental stress expression profiles
Bähler Lab SPAC18B11.05 Bähler Lab Transcriptome Viewer
Cyclebase SPAC18B11.05 Cell Cycle Data
Entrez Gene SPAC18B11.05 Link to Entrez Gene
SPD / RIKEN20/20E04Orfeome Localization Data
UniProtKB/SwissProtQ09712GPI mannosyltransferase 2
ArrayExpressQ09712Link to ArrayExpress
RefSeq PeptideNP_592878pig-V (predicted)
RefSeq mRNANM_001018278972h- pig-V (predicted) (gpi18), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAA90590ENA Protein Mapping
UniParcUPI000228F476UniProt Archive

Literature for gpi18

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Search: UK PMC or PubMed