rps7 (SPAC18G6.14c)

Gene Standard Namerps7 Characterisation Statusbiological_role_inferred
Systematic IDSPAC18G6.14c Feature Typeprotein coding
Synonyms Name Description
Product40S ribosomal protein S7 (predicted) Product Size195aa, 21.95 kDa
Genomic Location Chromosome I, 2242554-2241748 (807nt); CDS:2242523-2241936 (588nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0003735structural constituent of ribosomeISOSGD:S000005622GO_REF:0000024255
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0002181cytoplasmic translationNASGO_REF:0000051445
GO:0042254ribosome biogenesisISOSGD:S000005622GO_REF:0000024327
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0022627cytosolic small ribosomal subunitISOSGD:S000005622GO_REF:000002463
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002061inviable vegetative cell populationMicroscopyrps7ΔNullPECO:0000005, PECO:0000137PMID:236978061309

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002151inviable sporeMicroscopyrps7ΔNullPECO:0000005, PECO:0000137PMID:23697806447
penetrance FYPO_EXT:0000001
Ensembl transcript structure with UTRs, exons and introns


Exon Start End


Region Start End Reference
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF01251 Pfam IPR000554 Ribosomal protein S7e 5 190 1
PS00948 Prosite Patterns IPR000554 Ribosomal protein S7e 78 91 1
PTHR11278:SF0 HMMPANTHER 1 192 1
PTHR11278 HMMPANTHER IPR000554 Ribosomal protein S7e 1 192 1

View domain organization at Pfam

Protein Properties

Ave. residue weight 112.55 Da
Charge 18.00
Isoelectric point 10.85
Molecular weight 21.95 kDa
Number of residues 195

Protein Modifications

Term IDTerm NameEvidenceResidueReferenceCount
MOD:00696phosphorylated residuePMID:182575171192
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
68126.76during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
population_wideexperimental evidencePMID:23101633
149704.21during GO:0072690PECO:0000005,
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
11during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
population_wideexperimental evidencePMID:23101633
130during GO:0072690PECO:0000005,
population_wideexperimental evidencePMID:23101633
Species Distribution
conserved in fungi4564
conserved in eukaryotes4482
conserved in metazoa3419
conserved in vertebrates3394
conserved in eukaryotes only2485

Manually curated orthologous groups


Orthologs in Compara

Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
cid14poly(A) polymerase Cid14 Affinity Capture-MSPMID:20403971
air1zinc knuckle TRAMP complex subunit Air1 Affinity Capture-MSPMID:20403971
pab2poly(A) binding protein Pab2 Affinity Capture-MSPMID:19336419
bdf2BET family double bromodomain protein Bdf2 Affinity Capture-MSPMID:24013502
sog2leucine-rich repeat protein Lrp1 Affinity Capture-MSPMID:23462181
nak1PAK-related kinase Nak1 Affinity Capture-MSPMID:23462181
dsc1Golgi Dsc E3 ligase complex subunit Dsc1 Affinity Capture-MSPMID:21504829
hhp1serine/threonine protein kinase Hhp1 Affinity Capture-MSPMID:24055157
cka1serine/threonine protein kinase Cka1 Affinity Capture-MSPMID:23462181
epe1Jmjc domain chromatin associated protein Epe1 Affinity Capture-MSPMID:24013502
hhp2serine/threonine protein kinase Hhp2 Affinity Capture-MSPMID:24055157
External References
Database Identifier Description
NBRP SPAC18G6.14c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC18G6.14c Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPAC18G6.14c BioGRID Interaction Datasets
Expression Viewer SPAC18G6.14c Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPAC18G6.14c Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPAC18G6.14c Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPAC18G6.14c Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPAC18G6.14c Polyadenylation Viewer (Gullerova lab)
pombeTV SPAC18G6.14c Transcriptome Viewer (Bähler Lab)
Cyclebase SPAC18G6.14c Cell Cycle Data
GEO SPAC18G6.14c GEO profiles
PInt SPAC18G6.14c Protein-Protein Interaction Predictor (Bähler Lab)
WikiGene254255340S ribosomal protein S7 (predicted)
EntrezGene254255340S ribosomal protein S7 (predicted)
SPD / RIKEN06/06D07Orfeome Localization Data
UniProtKB/SwissProtQ1010140S ribosomal protein S7
ModBaseQ10101Database of comparative protein structure models
StringQ10101Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_59367740S ribosomal protein S7 (predicted)
RefSeq mRNANM_001019109972h- 40S ribosomal protein S7 (predicted) (rps7), mRNA
European Nucleotide ArchiveCAA92393ENA Protein Mapping
UniParcUPI000013511DUniProt Archive

Literature for rps7

Search: Europe PMC or PubMed

Release Version: PomBase:21_41 - 24 Feb 2014