srp14 (SPAC19B12.09)

Gene Standard Namesrp14 ChromosomeI
Systematic IDSPAC19B12.09 Gene Start4900282
Synonyms Gene End4901134
Productsignal recognition particle subunit Srp14 Gene Length853
Feature Typeprotein coding CDS Start4900565
Name Description CDS End4900977
Characterisation Statuspublished CDS Length413

Ensembl Gene Location
  1. fcp1
  2. SPAC19B12.06c
  3. SPAC19B12.07c
  4. atg4
  5. srp14
  6. sst2
  7. SPAC19B12.11c
  8. yip11
  9. cox1102
GO Molecular Function

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Term IDTerm NameEvidenceWith/FromReference
GO:00083127S RNA bindingIEAIPR003210, IPR009018GO_REF:0000002
GO:0030942endoplasmic reticulum signal peptide bindingICGO:0005786GO_REF:0000001
GO Biological Process

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Term IDTerm NameEvidenceWith/FromReference
GO:0006617SRP-dependent cotranslational protein targeting to membrane, signal sequence recognitionISOSGD:S000002250GO_REF:0000024
GO Cellular Component

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Term IDTerm NameEvidenceWith/FromReference
GO:0005634nucleusIDAPMID:16823372
GO:0005730nucleolusIDAPMID:16823372
GO:0005786signal recognition particle, endoplasmic reticulum targetingISOSGD:S000002250GO_REF:0000024
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
149002824900585
249006344900712
349007574901134

References

Region Start End Reference
three_prime_UTR49009784901134PMID:21511999
three_prime_UTR49009784901134PMID:21511999
five_prime_UTR49002824900564PMID:21511999
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF02290 IPR003210 Pfam Signal recognition particle, SRP14 subunit 3 85 1
G3DSA:3.30.720.10 IPR009018 Gene3D 2 91 2
SSF54762 IPR009018 SuperFamily 1 88 2
PTHR12013 IPR003210 hmmpanther Signal recognition particle, SRP14 subunit 1 106 1

View domain organization at Pfam

Protein Properties

Ave. residue weight 110.55 Da
Charge 8.00
Isoelectric point 10.09
Molecular weight 11.72 kDa
Number of residues 106
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide8520.21PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide2.7PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.45PMID:23101633
Subunit Composition
DescriptionQualifierReference
homodimeric PMID:19390147
Experimental Tools
DescriptionQualifierReference
structure PMID:19390147
Species Distribution
DescriptionQualifierReference
predominantly single copy (one to one)
conserved in fungi
conserved in eukaryotes
conserved in metazoa
conserved in vertebrates
conserved in eukaryotes only
Manually curated orthologous groups
SpeciesGeneDescription

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External References
Database Identifier Description
NBRP SPAC19B12.09 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC19B12.09 Retrieval of eukaryotic orthologs
BioGrid SPAC19B12.09 BioGRID Interaction Datasets
Bähler Lab SPAC19B12.09 Cell Cycle Expression Profile
Bähler Lab SPAC19B12.09 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC19B12.09 Pheromone response/mating expression profiles
Bähler Lab SPAC19B12.09 Environmental stress expression profiles
Bähler Lab SPAC19B12.09 Bähler Lab Transcriptome Viewer
Cyclebase SPAC19B12.09 Cell Cycle Data
PInt SPAC19B12.09 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPAC19B12.09 Entrez Gene
WikiGene2542565signal recognition particle subunit Srp14
Uniprot_genenameSRP14
EntrezGene2542565signal recognition particle subunit Srp14
SPD / RIKEN03/03C03Orfeome Localization Data
UniProtKB/SwissProtQ9P372Signal recognition particle subunit srp14
ModBaseQ9P372Database of comparative protein structure models
Pfam Protein DomainsQ9P372Pfam Domain Arrangement
RefSeq PeptideNP_594772signal recognition particle subunit Srp14
RefSeq mRNANM_001020199972h- signal recognition particle subunit Srp14 (srp14), mRNA
European Nucleotide ArchiveCAC00557ENA Protein Mapping
UniParcUPI0000069997UniProt Archive

Literature for srp14
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013