scs7 (SPAC19G12.08)


Gene Standard Namescs7 Characterisation Statuspublished
Systematic IDSPAC19G12.08 Feature Typeprotein coding
Synonyms Name Description
Productsphingosine hydroxylase Scs7 Product Size347aa, 40.23 kDa
Genomic Location Chromosome I, 4056794-4058815 (2022nt); CDS:4056958-4058289 (1332nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0005506iron ion bindingIEAIPR006694GO_REF:000000223
GO:0000170sphingosine hydroxylase activityISOSGD:S000004885GO_REF:00000242
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0006633fatty acid biosynthetic processIEAIPR006694GO_REF:000000229
GO:0006675mannosyl-inositol phosphorylceramide metabolic processIMPPMID:203887305
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0005783endoplasmic reticulumIDAPMID:16823372594
ISOSGD:S000004885GO_REF:0000024
GO:0005789endoplasmic reticulum membraneICGO:0005783, GO:0016020GO_REF:0000001207
GO:0016021integral component of membraneIEAUniProtKB-KW:KW-0812GO_REF:00000371016
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002620normal cell population growth on trichostatin ACell growth assayscs7ΔNullPECO:0000005, PECO:0000201, PECO:0000142PMID:23861937110
FYPO:0001098sensitive to 4-nitroquinoline N-oxideCell growth assayscs7ΔNullPECO:0000137, PECO:0000005PMID:19264558159
expressivity FYPO_EXT:0000003
FYPO:0000096sensitive to cadmiumcell growth assayscs7ΔNullPECO:0000102, PECO:0000005, PECO:0000137PMID:18684775244
expressivity FYPO_EXT:0000002
FYPO:0000085sensitive to camptothecincompetitive growth assay evidencescs7ΔNullPMID:20537132200
expressivity FYPO_EXT:0000003Cell growth assayscs7ΔNullPECO:0000137, PECO:0000005PMID:19264558
FYPO:0000271sensitive to salt stresscell growth assayscs7ΔNullPECO:0000207, PECO:0000137, PECO:0000102, PECO:0000005PMID:1868477573
expressivity FYPO_EXT:0000002
FYPO:0002617sensitive to sodium butyrateCell growth assayscs7ΔNullPECO:0000201, PECO:0000005, PECO:0000142PMID:2386193793
expressivity FYPO_EXT:0000002
FYPO:0000115sensitive to valproic acidCell growth assayscs7ΔNullPECO:0000201, PECO:0000005, PECO:0000142PMID:23861937154
expressivity FYPO_EXT:0000001
FYPO:0002060viable vegetative cell populationMicroscopyscs7ΔNullPECO:0000005, PECO:0000137PMID:236978063755
Microscopyscs7ΔNullPMID:20473289

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002177viable vegetative cell with normal cell morphologyMicroscopyscs7ΔNullPECO:0000005, PECO:0000137PMID:236978063078
penetrance FYPO_EXT:0000001
Target Of
RelationshipGeneProductReference
regulated by sre1 sterol regulatory element binding protein, transcription factor Sre1 PMID:16537923
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
140567944057015
240573044058815

UTRs

Region Start End Reference
three_prime_UTR40582904058815PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF04116 Pfam IPR006694 Fatty acid hydroxylase 189 311 5
TMhelix TMHMM 156 175 959
TMhelix TMHMM 217 234 959
TMhelix TMHMM 241 263 959
TMhelix TMHMM 267 289 959
TMhelix TMHMM 180 202 959
PTHR12863 HMMPANTHER 10 334 1
PIRSF005149 PIRSF IPR014430 Inositolphosphorylceramide-B hydroxylase 1 345 1

View domain organization at Pfam

Sequence Ontology

Term IDTerm NameReferenceCount
SO:0001812transmembrane_helix465

Protein Properties

Ave. residue weight 115.94 Da
Charge 10.00
Isoelectric point 7.81
Molecular weight 40.23 kDa
Number of residues 347
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
2496.23during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
19929.07during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
15during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
4during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
Species Distribution
DescriptionQualifierReferenceCount
predominantly single copy (one to one)3080
conserved in fungi4564
conserved in eukaryotes4482
conserved in metazoa3419
conserved in vertebrates3394
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
pnk1DNA kinase/phosphatase Pnk1 Negative GeneticPMID:18818364
hip1hira protein, histone chaperone Hip1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
pph3serine/threonine protein phosphatase, PP4 complex subunit Pph3 (predicted) Negative GeneticPMID:22681890
cia1histone chaperone Cia1 Negative GeneticPMID:18818364
shg1Set1C complex subunit Shg1 Negative GeneticPMID:22681890
php5CCAAT-binding factor complex subunit Php5 Positive GeneticPMID:22681890
elp5elongator complex subunit Elp5 (predicted) Negative GeneticPMID:18818364
mud1UBA domain protein Mud1 Negative GeneticPMID:18818364
hht2histone H3 h3.2 Negative GeneticPMID:18818364
rpb7DNA-directed RNA polymerase complex II subunit Rpb7 Negative GeneticPMID:22681890
SPBC354.09cTre1 family protein, involved in vacuolar protein degradation (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
elp3elongator complex, histone acetyltransferase subunit Elp3 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPBC8D2.16cDUF171 family protein Negative GeneticPMID:18818364
dbr1RNA lariat debranching enzyme Dbr1 Positive GeneticPMID:18818364
spn2septin Spn2 Positive GeneticPMID:18818364
ddb1damaged DNA binding protein Ddb1 Negative GeneticPMID:18818364
snf5SWI/SNF complex subunit Snf5 Negative GeneticPMID:18818364
SPBC839.03cneddylation protein Dcn1 (predicted) Negative GeneticPMID:22681890
dsc2Golgi Dsc E3 ligase complex subunit Dsc2 Positive GeneticPMID:21504829
Positive GeneticPMID:22681890
pst2Clr6 histone deacetylase complex subunit Pst2 Negative GeneticPMID:22681890
msa1RNA-binding protein Msa1 Positive GeneticPMID:18818364
dad2DASH complex subunit Dad2 Negative GeneticPMID:18818364
tma23ribosome biogenesis protein Tma23 (predicted) Negative GeneticPMID:18818364
dsc3Golgi Dsc E3 ligase complex subunit Dsc3 Positive GeneticPMID:21504829
Positive GeneticPMID:22681890
dnm1dynamin Dnm1 Positive GeneticPMID:18818364
swc5Swr1 complex subunit Swc5 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
ccr4CCR4-Not complex subunit Ccr4 (predicted) Positive GeneticPMID:18818364
dad3DASH complex subunit Dad3 Negative GeneticPMID:22681890
SPBP8B7.10cU3 snoRNP-associated protein Utp16 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
dsc1Golgi Dsc E3 ligase complex subunit Dsc1 Positive GeneticPMID:21504829
mde3serine/threonine protein kinase, meiotic Mde3 Negative GeneticPMID:18818364
csn1COP9/signalosome complex subunit Csn1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
hip4histone promoter control protein Hip4 Negative GeneticPMID:18818364
usp102U1 snRNP-associated protein Usp102 Negative GeneticPMID:22681890
ebs1EST1 family nonsense-mediated mRNA decay (NMD) pathway protein Ebs1 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
ubc6ubiquitin conjugating enzyme Ubc6 (predicted) Positive GeneticPMID:18818364
php3CCAAT-binding factor complex subunit Php3 Positive GeneticPMID:22681890
fkbp39FKBP-type peptidyl-prolyl cis-trans isomerase (predicted) Positive GeneticPMID:18818364
meu14sporulation specific PIL domain protein Meu14 Negative GeneticPMID:22681890
eme1Holliday junction resolvase subunit Eme1 Negative GeneticPMID:18818364
hhf2histone H4 h4.2 Negative GeneticPMID:18818364
nap1nucleosome assembly protein Nap1 Positive GeneticPMID:18818364
mlh1MutL family protein Mlh1 (predicted) Positive GeneticPMID:18818364
ynd1nucleoside diphosphatase Ynd1 Negative GeneticPMID:22681890
fft3SMARCAD1 family ATP-dependent DNA helicase Fft3 Positive GeneticPMID:22681890
ubr1N-end-recognizing protein Ubr1 Negative GeneticPMID:22681890
ftp105Ubp5 interacting protein Ftp105 Negative GeneticPMID:18818364
rpa12DNA-directed RNA polymerase complex I subunit Rpa12 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
caf1CCR4-Not complex CAF1 family ribonuclease subunit Caf1 Positive GeneticPMID:18818364
exo1exonuclease I Exo1 Positive GeneticPMID:18818364
hos2histone deacetylase (class I) Hos2 Positive GeneticPMID:18818364
nup131nucleoporin Nup131 Positive GeneticPMID:18818364
pyp1tyrosine phosphatase Pyp1 Positive GeneticPMID:22681890
SPAC144.05ATP-dependent DNA helicase (predicted) Positive GeneticPMID:18818364
rxt2histone deacetylase complex subunit Rxt2 Negative GeneticPMID:22681890
Phenotypic EnhancementPMID:19547744
SPAC139.01cnuclease, XP-G family (predicted) Positive GeneticPMID:18818364
swd1Set1C complex subunit Swd1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPAC12G12.01cSEA complex subunit ubiquitin-protein ligase E3 Negative GeneticPMID:18818364
rec14Ski complex subunit Rec14 Positive GeneticPMID:18818364
rok1ATP-dependent RNA helicase Rok1 (predicted) Negative GeneticPMID:18818364
ckb2CK2 family regulatory subunit (predicted) Positive GeneticPMID:18818364
elp1elongator subunit Elp1 (predicted) Negative GeneticPMID:18818364
SPBC16C6.05mitochondrial translation initiation factor (predicted) Positive GeneticPMID:18818364
prw1Clr6 histone deacetylase complex subunit Prw1 Negative GeneticPMID:22681890
far10SIP/FAR complex FHA domain subunit Far10/Csc1 Negative GeneticPMID:22681890
dad4DASH complex subunit Dad4 Negative GeneticPMID:22681890
ies2Ino80 complex subunit Ies2 Negative GeneticPMID:18818364
pfd1prefoldin subunit 1 (predicted) Positive GeneticPMID:18818364
cph1Clr6 histone deacetylase associated PHD protein-1 Cph1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
byr2MAP kinase kinase kinase Byr2 Negative GeneticPMID:18818364
SPBC31F10.10czf-MYND type zinc finger protein Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
not3CCR4-Not complex subunit Not3/5 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
atp11F1-ATPase chaperone Atp11 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
ubp8SAGA complex ubiquitin C-terminal hydrolase Ubp8 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
ryh1GTPase Ryh1 Positive GeneticPMID:18818364
srb10cyclin-dependent protein Srb mediator subunit kinase Srb10 Positive GeneticPMID:22681890
bdf2BET family double bromodomain protein Bdf2 Positive GeneticPMID:18818364
fft2SMARCAD1 family ATP-dependent DNA helicase Fft2 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
hrp1ATP-dependent DNA helicase Hrp1 Positive GeneticPMID:18818364
SPAC824.04WD repeat protein (predicted) Negative GeneticPMID:18818364
pht1histone H2A variant H2A.Z, Pht1 Negative GeneticPMID:22681890
hrp3ATP-dependent DNA helicase Hrp3 Negative GeneticPMID:18818364
tsc1hamartin Negative GeneticPMID:22681890
pyp2tyrosine phosphatase Pyp2 Positive GeneticPMID:22681890
SPAC227.10prefoldin subunit 2 (predicted) Positive GeneticPMID:18818364
nhp6High-mobility group non-histone chromatin protein (predicted) Positive GeneticPMID:18818364
ser2phosphoserine phosphatase Ser2 (predicted) Positive GeneticPMID:18818364
air1zinc knuckle TRAMP complex subunit Air1 Negative GeneticPMID:18818364
SPCC162.11curidine kinase/uracil phosphoribosyltransferase (predicted) Positive GeneticPMID:18818364
san1sir antagonist Positive GeneticPMID:18818364
arp6actin-like protein Arp6 Positive GeneticPMID:18818364
toe4transcription factor, zf-fungal binuclear cluster type(predicted) Positive GeneticPMID:18818364
alp14TOG ortholog Alp14 Negative GeneticPMID:18818364
elp2elongator complex subunit Elp2 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
rdp1RNA-directed RNA polymerase Rdp1 Negative GeneticPMID:18818364
SPCC645.13transcription elongation regulator (predicted) Negative GeneticPMID:18818364
rnc1RNA-binding protein that suppresses calcineurin deletion Rnc1 Positive GeneticPMID:18818364
ppa2serine/threonine protein phosphatase Ppa2 Positive GeneticPMID:22681890
SPBC83.05mitochondrial RNA-binding protein (predicted) Negative GeneticPMID:18818364
par1protein phosphatase regulatory subunit Par1 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
prp4serine/threonine protein kinase Prp4 Negative GeneticPMID:22681890
hta1histone H2A alpha Positive GeneticPMID:18818364
set1histone lysine methyltransferase Set1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
arp8actin-like protein, Ino80 complex subunit Arp8 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
rtt109RTT109 family histone lysine acetyltransferase Positive GeneticPMID:18818364
clr4histone H3 lysine methyltransferase Clr4 Negative GeneticPMID:18818364
puf3RNA-binding protein Puf3 (predicted) Positive GeneticPMID:18818364
cdt2WD repeat protein Cdt2 Negative GeneticPMID:22681890
aut12autophagy associated protein Aut12 (predicted) Positive GeneticPMID:18818364
SPAC644.09alanine racemase (predicted) Positive GeneticPMID:18818364
png2ING family homolog Png2 Negative GeneticPMID:22681890
srp1SR family protein, human SRFS2 ortholog Srp1 Negative GeneticPMID:22681890
pek1MAP kinase kinase Pek1 Negative GeneticPMID:18818364
cho1phosphatidyl-N-methylethanolamine N-methyltransferase (predicted) Positive GeneticPMID:18818364
hst2Sir2 family histone deacetylase Hst2 Negative GeneticPMID:18818364
clp1Cdc14-related protein phosphatase Clp1/Flp1 Negative GeneticPMID:22681890
top1DNA topoisomerase I Positive GeneticPMID:18818364
res1MBF transcription factor complex subunit Res1 Positive GeneticPMID:22681890
rdh54ATP-dependent DNA helicase Rdh54 Positive GeneticPMID:18818364
lub1WD repeat protein Lub1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
spn1septin Spn1 Positive GeneticPMID:18818364
ung1uracil DNA N-glycosylase Ung1 Negative GeneticPMID:22681890
rox3mediator complex subunit Med19/Rox3 Positive GeneticPMID:18818364
epe1Jmjc domain chromatin associated protein Epe1 Positive GeneticPMID:18818364
fin1serine/threonine protein kinase, NIMA related Fin1 Negative GeneticPMID:18818364
msn5karyopherin (predicted) Negative GeneticPMID:18818364
pmc2mediator complex subunit Pmc2/Med1 Positive GeneticPMID:18818364
ssr3SWI/SNF and RSC complex subunit Ssr3 Positive GeneticPMID:18818364
erg5C-22 sterol desaturase Erg5 Positive GeneticPMID:18818364
ubc13ubiquitin conjugating enzyme Ubc13 Positive GeneticPMID:18818364
tom70mitochondrial TOM complex subunit Tom70 (predicted) Positive GeneticPMID:22681890
ypa1protein phosphatase type 2A regulator, PTPA family Ypa1 Negative GeneticPMID:18818364
ymr1phosphatidylinositol-3-phosphatase, myotubularin family (predicted) Positive GeneticPMID:18818364
cph2Clr6 histone deacetylase associated PHD protein-2 Cph2 Negative GeneticPMID:22681890
uds1septation protein Uds1 Negative GeneticPMID:18818364
ptc2protein phosphatase 2C Ptc2 Positive GeneticPMID:22681890
chp1chromodomain protein Chp1 Negative GeneticPMID:22681890
nrm1MBF complex corepressor nrm1 Negative GeneticPMID:22681890
get1GET complex subunit Get1 (predicted) Negative GeneticPMID:18818364
ngg1SAGA complex subunit Ngg1 Positive GeneticPMID:18818364
SPBC215.07cPWWP domain protein (predicted) Negative GeneticPMID:22681890
sen1ATP-dependent 5' to 3' DNA/RNA helicase Sen1 Negative GeneticPMID:22681890
spf1Set1C PHD Finger protein Spf1 Negative GeneticPMID:18818364
csn2COP9/signalosome complex subunit Csn2 Negative GeneticPMID:22681890
spp27RNA polymerase I upstream activation factor complex subunit Spp27 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
sdu1PPPDE peptidase family (predicted) Negative GeneticPMID:18818364
SPBC3F6.01cserine/threonine protein phosphatase (predicted) Negative GeneticPMID:22681890
sgf29SAGA complex subunit Sgf29 Positive GeneticPMID:18818364
vps71Swr1 complex subunit Vps71 Positive GeneticPMID:18818364
mug183histone chaperone Rtt106-like (predicted) Negative GeneticPMID:18818364
knd1Cullin-associated NEDD8-dissociated protein Knd1 (predicted) Negative GeneticPMID:18818364
cdk9P-TEFb-associated cyclin-dependent protein kinase Cdk9 Negative GeneticPMID:18818364
ppk8serine/threonine protein kinase Ppk8 (predicted) Positive GeneticPMID:22681890
ppk16serine/threonine protein kinase Ppk16 (predicted) Positive GeneticPMID:18818364
shk2PAK-related kinase Shk2 Positive GeneticPMID:18818364
cti6histone deacetylase complex subunit Cti6 Negative GeneticPMID:22681890
ubp6ubiquitin C-terminal hydrolase Ubp6 Negative GeneticPMID:18818364
reb1RNA polymerase I transcription termination factor Reb1 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
ubp3ubiquitin C-terminal hydrolase Ubp3 Positive GeneticPMID:18818364
pku80Ku domain protein Pku80 Negative GeneticPMID:22681890
pmc5mediator complex subunit Pmc5 Positive GeneticPMID:18818364
dcr1dicer Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
mid1medial ring protein Mid1 Negative GeneticPMID:22681890
mik1mitotic inhibitor kinase Mik1 Negative GeneticPMID:22681890
ypa2protein phosphatase type 2A regulator, PTPA family Ypa2 Positive GeneticPMID:18818364
apn2AP-endonuclease Apn2 Positive GeneticPMID:18818364
rcd1RNA-binding protein, CCR4-NOT complex subunit Rcd1 Negative GeneticPMID:18818364
set5histone lysine methyltransferase Set5 (predicted) Negative GeneticPMID:18818364
mpr1histidine-containing response regulator phosphotransferase Mpr1 Positive GeneticPMID:22681890
set9histone lysine methyltransferase Set9 Negative GeneticPMID:18818364
tea2kinesin-like protein Tea2 Positive GeneticPMID:18818364
ask1DASH complex subunit Ask1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
nup40nucleoporin Nup40 Negative GeneticPMID:18818364
alp13MRG family Clr6 histone deacetylase complex subunit Alp13 Negative GeneticPMID:22681890
swr1SNF2 family helicase Swr1 Positive GeneticPMID:18818364
elp4elongator complex subunit Elp4 (predicted) Negative GeneticPMID:18818364
mug154conserved fungal protein Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
dsk1SR protein-specific kinase Dsk1 Positive GeneticPMID:18818364
rsv2transcription factor Rsv2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
set3histone lysine methyltransferase Set3 Positive GeneticPMID:18818364
SPCC126.13chistone deacetylase complex subunit, SAP128 family (predicted) Positive GeneticPMID:18818364
pob3FACT complex subunit Pob3 Positive GeneticPMID:22681890
tas3RITS complex subunit 3 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
fbp1fructose-1,6-bisphosphatase Fbp1 Positive GeneticPMID:18818364
rpl160160S ribosomal protein L13/L16 (predicted) Negative GeneticPMID:18818364
ubp7ubiquitin C-terminal hydrolase Ubp7 Negative GeneticPMID:18818364
res2MBF transcription factor complex subunit Res2 Positive GeneticPMID:18818364
ppk29Ark1/Prk1 family protein kinase Ppk29 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPBC30B4.02cR3H and G-patch domain, implicated in splicing (predicted) Negative GeneticPMID:18818364
abo2ATPase with bromodomain protein (predicted) Negative GeneticPMID:18818364
amk2AMP-activated protein kinase beta subunit Amk2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
ssp2serine/threonine protein kinase Ssp2 Negative GeneticPMID:22681890
tos4FHA domain protein Tos4 (predicted) Positive GeneticPMID:18818364
dsc4Golgi Dsc E3 ligase complex subunit Dsc3 Positive GeneticPMID:21504829
SPBC1734.07cTRAPP complex subunit Trs85 (predicted) Negative GeneticPMID:18818364
bun107WD repeat protein, human WDR48 family Bun107 Negative GeneticPMID:18818364
sir2Sir2 family histone deacetylase Sir2 Positive GeneticPMID:18818364
vps5retromer complex subunit Vps5 Negative GeneticPMID:22681890
SPBC17A3.03cphosphoprotein phosphatase (predicted) Negative GeneticPMID:18818364
psl1cyclin pho85 family Psl1 (predicted) Negative GeneticPMID:22681890
ppk15serine/threonine protein kinase Ppk15 (predicted) Positive GeneticPMID:18818364
ufd2ubiquitin-protein ligase E4 (predicted) Negative GeneticPMID:18818364
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
hhp1serine/threonine protein kinase Hhp1 Affinity Capture-MSPMID:24055157
hhp2serine/threonine protein kinase Hhp2 Affinity Capture-MSPMID:24055157
tea1cell end marker Tea1 Affinity Capture-MSPMID:21652630
External References
Database Identifier Description
NBRP SPAC19G12.08 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC19G12.08 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPAC19G12.08 BioGRID Interaction Datasets
Expression Viewer SPAC19G12.08 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPAC19G12.08 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPAC19G12.08 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPAC19G12.08 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPAC19G12.08 Polyadenylation Viewer (Gullerova lab)
pombeTV SPAC19G12.08 Transcriptome Viewer (Bähler Lab)
Cyclebase SPAC19G12.08 Cell Cycle Data
GEO SPAC19G12.08 GEO profiles
PInt SPAC19G12.08 Protein-Protein Interaction Predictor (Bähler Lab)
WikiGene2542519sphingosine hydroxylase (predicted)
EntrezGene2542519sphingosine hydroxylase (predicted)
SPD / RIKEN20/20F03Orfeome Localization Data
UniProtKB/SwissProtO13846Ceramide very long chain fatty acid hydroxylase-like protein C19G12.08
ModBaseO13846Database of comparative protein structure models
StringO13846Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_594423sphingosine hydroxylase (predicted)
RefSeq mRNANM_001019852972h- sphingosine hydroxylase (predicted) (SPAC19G12.08), mRNA
European Nucleotide ArchiveCAB10119ENA Protein Mapping
UniParcUPI000006B93AUniProt Archive

Literature for scs7

Search: Europe PMC or PubMed

Release Version: PomBase:21_41 - 24 Feb 2014