coa3 (SPAC1B3.21)

Gene Standard Namecoa3 ChromosomeI
Systematic IDSPAC1B3.21 Gene Start4942226
Synonymstam3 Gene End4942435
Productcytochrome C oxidase assembly factor 3, Coa3 (predicted) Gene Length210
Feature Typeprotein coding CDS Start4942226
Name DescriptionTranscripts Altered in Meiosis CDS End4942435
Characterisation Statusbiological_role_inferred CDS Length210

Ensembl Gene Location
  1. not3
  2. SPNCRNA.1038
  3. snR90
  4. SPAC1B3.06c
  5. vps28
  6. SPAC1B3.08
  7. coa3
  8. SPAC1B3.09c
  9. SPAC1B3.10c
  10. ypt4
  11. SPAC1B3.20
GO Biological Process

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0033617mitochondrial respiratory chain complex IV assemblyISOSGD:S000007611GO_REF:0000024
GO Cellular Component

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0005739mitochondrionISOSGD:S0000007611PMID:21270388
GO:0031305integral to mitochondrial inner membraneISOSGD:S000007611GO_REF:0000024
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
149422264942435
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF09813 IPR018628 Pfam Coiled-coil domain-containing protein 56 13 59 1
TMhelix TMHMM 20 42 955

View domain organization at Pfam

Protein Properties

Ave. residue weight 114.25 Da
Charge 0.50
Isoelectric point 7.54
Molecular weight 7.88 kDa
Number of residues 69
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide1143.72PMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide0.92PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.19PMID:23101633
Warning
DescriptionQualifierReference
new gene PMID:21270388
Species Distribution
DescriptionQualifierReference
predominantly single copy (one to one)
conserved in fungi
conserved in eukaryotes
conserved in metazoa
conserved in vertebrates
conserved in eukaryotes only
Manually curated orthologous groups
SpeciesGeneDescription

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External References
Database Identifier Description
NBRP SPAC1B3.21 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC1B3.21 Retrieval of eukaryotic orthologs
BioGrid SPAC1B3.21 BioGRID Interaction Datasets
Bähler Lab SPAC1B3.21 Cell Cycle Expression Profile
Bähler Lab SPAC1B3.21 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC1B3.21 Pheromone response/mating expression profiles
Bähler Lab SPAC1B3.21 Environmental stress expression profiles
Bähler Lab SPAC1B3.21 Bähler Lab Transcriptome Viewer
Cyclebase SPAC1B3.21 Cell Cycle Data
PInt SPAC1B3.21 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPAC1B3.21 Entrez Gene
Uniprot_genenameTAM3
UniProtKB/SwissProtG2TRJ9Cytochrome oxidase assembly protein 3, mitochondrial
ModBaseG2TRJ9Database of comparative protein structure models
Pfam Protein DomainsG2TRJ9Pfam Domain Arrangement
European Nucleotide ArchiveCCD31342ENA Protein Mapping
UniParcUPI000228F392UniProt Archive

Literature for coa3
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013