SPAC1F8.07c

Synonyms ChromosomeI
Productpyruvate decarboxylase (predicted) Gene Start103594
Feature Typeprotein coding Gene End101715
Name Description CDS Start103544
Characterisation Statusbiological_role_inferred CDS End101836

Ensembl Gene Location
SPNCRNA.606 isp3 SPNCRNA.607 fta5 > SPAC1F8.07c < SPAC1F8.08 SPAC11D3.19 SPAC11D3.01c SPNCRNA.608 SPAC11D3.02c
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1103594101872
2101869101715

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF02776 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain 9 184 126.7 6
PF02775 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP-binding 415 539 81.8 6
PF00205 Pfam Thiamine pyrophosphate enzyme, central domain 207 309 69.8 6
52467 Superfamily 171 346 102.4 11
52518 Superfamily 8 193 157.5 12
52518 Superfamily 369 568 171.1 12
PS00187 scanprosite TPP-binding enzyme, conserved site 429 448 3
PIRSF036565 PIRSF Pyruvate decarboxylase/indolepyruvate decarboxylase 1 563 1040.5 4


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residueTemporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Protein Properties

Ave. residue weight 108.36 Da
Charge -9.00
Isoelectric point 5.26
Molecular weight 61.55 kDa
Number of residues 568
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006090pyruvate metabolic processISS Interpro:IPR012110GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006090
GO:0009063cellular amino acid catabolic processISS SGD:S000003319GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0009063

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000287magnesium ion bindingIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000287
GO:0004737pyruvate decarboxylase activityISS Interpro:IPR012110GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0004737
IEAGO_REF:0000003
GO:0030976thiamine pyrophosphate bindingIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030976

Warning

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DescriptionSourceAll Genes
frameshifted Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000108
sequence error in genomic data Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000129
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
conserved in BacteriaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000086
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in ArchaeaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000130

Interactions

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Physical Interactions from BioGRID

Gene Feature Evidence Source
stc1LIM-like protein linking chromatin modification to RNAi, Stc1 Affinity Capture-MS
zfs1CCCH tandem zinc finger protein, human Tristetraprolin homolog Zfs1, involved in mRNA catabolism Two-hybrid
sds23inducer of sexual development Sds23/Moc1 Two-hybrid
moc3transcription factor Moc3 Two-hybrid

External References

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Database Identifier Description
NBRP SPAC1F8.07c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC1F8.07c Retrieval of eukaryotic orthologs
BioGrid SPAC1F8.07c BioGRID Interaction Datasets
Bähler Lab SPAC1F8.07c Cell Cycle Expression Profile
Bähler Lab SPAC1F8.07c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC1F8.07c Pheromone response/mating expression profiles
Bähler Lab SPAC1F8.07c Environmental stress expression profiles
Bähler Lab SPAC1F8.07c Bähler Lab Transcriptome Viewer
Cyclebase SPAC1F8.07c Cell Cycle Data
Entrez Gene SPAC1F8.07c Link to Entrez Gene
SPD / RIKEN45/45G12Orfeome Localization Data
UniProtKB/SwissProtQ92345Probable pyruvate decarboxylase C1F8.07c
ArrayExpressQ92345Link to ArrayExpress
RefSeq PeptideNP_592796pyruvate decarboxylase (predicted)
RefSeq mRNANM_001018196972h- pyruvate decarboxylase (predicted) (SPAC1F8.07c), mRNA
Uniprot/SPTREMBLP78913Schizosaccharomyces pombe
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveD89264ENA EMBL mapping
European Nucleotide ArchiveBAA13925ENA Protein Mapping
European Nucleotide ArchiveCAB03601ENA Protein Mapping
UniParcUPI000228F40BUniProt Archive

Literature for SPAC1F8.07c

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Search: UK PMC or PubMed