cyp8 (SPAC21E11.05c)

Synonyms ChromosomeI
Productcyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8 Gene Start4257641
Feature Typeprotein coding Gene End4254965
Name Description CDS Start4257484
Characterisation Statuspublished CDS End4255729

Ensembl Gene Location
yak3 rpl801 pcr1 ppr1 > cyp8 < tif224 prl13 SPAC21E11.07 lcb2
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
142576414257273
242571324256218
342561524254965

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00160 Pfam Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain 278 426 156.4 9
50891 Superfamily 276 452 213.9 9
57850 Superfamily 38 115 41.8 55
PS50072 PROSITE Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain 282 428 32.758 9
PS00170 scanprosite Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain 312 329 8
PR00153 Prints Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain 291 306 39.15 9
PR00153 Prints Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain 388 403 47.58 9
PR00153 Prints Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain 375 387 48.24 9
PR00153 Prints Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain 317 329 71.5 9
PR00153 Prints Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain 360 375 72.29 9

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000288coiled-coilTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000288

Protein Properties

Ave. residue weight 113.62 Da
Charge 21.00
Isoelectric point 9.39
Molecular weight 58.63 kDa
Number of residues 516
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

 Contact Curators | Back to Top
Cellular Component
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634

Molecular Function
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0003755peptidyl-prolyl cis-trans isomerase activityIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0003755
IEAGO_REF:0000004
IEAGO_REF:0000003

Warning

 Contact Curators | Back to Top
DescriptionSourceAll Genes
gene structure updatedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070
sequence updatedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0002438

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPAC21E11.05c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC21E11.05c Retrieval of eukaryotic orthologs
BioGrid SPAC21E11.05c BioGRID Interaction Datasets
Bähler Lab SPAC21E11.05c Cell Cycle Expression Profile
Bähler Lab SPAC21E11.05c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC21E11.05c Pheromone response/mating expression profiles
Bähler Lab SPAC21E11.05c Environmental stress expression profiles
Bähler Lab SPAC21E11.05c Bähler Lab Transcriptome Viewer
Cyclebase SPAC21E11.05c Cell Cycle Data
Entrez Gene SPAC21E11.05c Link to Entrez Gene
SPD / RIKEN35/35D06Orfeome Localization Data
UniProtKB/SwissProtQ09928Peptidyl-prolyl cis-trans isomerase cyp8
ArrayExpressQ09928Link to ArrayExpress
RefSeq PeptideNP_594502cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8
RefSeq mRNANM_001019931972h- cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8 (cyp8), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAA91964ENA Protein Mapping
UniParcUPI0000D7E697UniProt Archive

Literature for cyp8

 Contact Curators | Back to Top
Search: UK PMC or PubMed