SPAC22A12.10

Gene Standard NameUnassigned ChromosomeI
Systematic IDSPAC22A12.10 Gene Start1172209
Synonyms Gene End1176801
Productdiacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase (predicted) Gene Length4593
Feature Typeprotein coding CDS Start1174571
Name Description CDS End1175781
Characterisation Statusbiological_role_inferred CDS Length1211

Ensembl Gene Location
  1. ogm1
  2. SPAC22A12.08c
  3. SPAC22A12.10
  4. sap114
  5. SPNCRNA.718
  6. dak1
  7. rrp40
  8. mug84
  9. SPAC22A12.14c
  10. SPNCRNA.719
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0002060viable vegetative cell populationMicroscopySPAC22A12.10delta (deletion)deletionPMID:20473289
GO Molecular Function

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Term IDTerm NameEvidenceWith/FromReference
GO:0004142diacylglycerol cholinephosphotransferase activityISSUniProtKB:P22140GO_REF:0000001
GO:0004307ethanolaminephosphotransferase activityISOSGD:S000001165GO_REF:0000024
GO Biological Process

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Term IDTerm NameEvidenceWith/FromReference
GO:0006646phosphatidylethanolamine biosynthetic processISOSGD:S000001165GO_REF:0000024
GO Cellular Component

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Term IDTerm NameEvidenceWith/FromReference
GO:0005783endoplasmic reticulumISOSGD:S000001165GO_REF:0000024
GO:0005789endoplasmic reticulum membraneICGO:0016020, GO:0005783GO_REF:0000001
GO:0016021integral to membraneIEAUniProtKB:KW-0812GO_REF:0000037
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
111722091174707
211747581176801

References

Region Start End Reference
three_prime_UTR11757821176801PMID:21511999
three_prime_UTR11757821176801PMID:21511999
five_prime_UTR11722091174570PMID:21511999
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF01066 IPR000462 Pfam CDP-alcohol phosphatidyltransferase 44 144 4
TMhelix TMHMM 169 191 955
TMhelix TMHMM 284 306 955
TMhelix TMHMM 135 157 955
TMhelix TMHMM 217 239 955
TMhelix TMHMM 313 335 955
TMhelix TMHMM 46 68 955
TMhelix TMHMM 345 367 955
TMhelix TMHMM 252 274 955
PS00379 IPR000462 Prosite Patterns CDP-alcohol phosphatidyltransferase 99 121 4
PIRSF015665 IPR014472 PIRSF Choline/ethanolamine phosphotransferase 1 386 1
PTHR10414 hmmpanther 3 386 1
PTHR10414:SF4 hmmpanther 3 386 1

View domain organization at Pfam

Sequence Ontology

Term IDTerm NameReference
SO:0001812transmembrane_helix

Protein Properties

Ave. residue weight 114.21 Da
Charge 3.50
Isoelectric point 7.26
Molecular weight 44.08 kDa
Number of residues 386
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide6634.58PMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide10326.09PMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide5.4PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide1.8PMID:23101633
Species Distribution
DescriptionQualifierReference
conserved in fungi
conserved in eukaryotes
conserved in metazoa
conserved in vertebrates
conserved in eukaryotes only
Manually curated orthologous groups
SpeciesGeneDescription

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External References
Database Identifier Description
NBRP SPAC22A12.10 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC22A12.10 Retrieval of eukaryotic orthologs
BioGrid SPAC22A12.10 BioGRID Interaction Datasets
Bähler Lab SPAC22A12.10 Cell Cycle Expression Profile
Bähler Lab SPAC22A12.10 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC22A12.10 Pheromone response/mating expression profiles
Bähler Lab SPAC22A12.10 Environmental stress expression profiles
Bähler Lab SPAC22A12.10 Bähler Lab Transcriptome Viewer
Cyclebase SPAC22A12.10 Cell Cycle Data
PInt SPAC22A12.10 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPAC22A12.10 Entrez Gene
WikiGene2541829CDP-alcohol phosphatidyltransferase class-I family protein
EntrezGene2541829CDP-alcohol phosphatidyltransferase class-I family protein
IntEnz2.7.8.1
IntEnz2.7.8.2
SPD / RIKEN22/22B04Orfeome Localization Data
UniProtKB/SwissProtO13901Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein C22A12.10
ModBaseO13901Database of comparative protein structure models
Pfam Protein DomainsO13901Pfam Domain Arrangement
RefSeq PeptideNP_593240CDP-alcohol phosphatidyltransferase class-I family protein
RefSeq mRNANM_001018637972h- CDP-alcohol phosphatidyltransferase class-I family protein (SPAC22A12.10), mRNA
European Nucleotide ArchiveCAB16580ENA Protein Mapping
UniParcUPI000006982FUniProt Archive

Literature for SPAC22A12.10
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013