mug84 (SPAC22A12.13)

Gene Standard Namemug84 ChromosomeI
Systematic IDSPAC22A12.13 Gene Start1180184
Synonyms Gene End1181157
Productpig-P subunit (predicted) Gene Length974
Feature Typeprotein coding CDS Start1180254
Name DescriptionMeiotically Upregulated Gene CDS End1180841
Characterisation Statusbiological_role_inferred CDS Length588

Ensembl Gene Location
  1. SPAC22A12.10
  2. sap114
  3. SPNCRNA.718
  4. dak1
  5. rrp40
  6. mug84
  7. SPAC22A12.14c
  8. SPNCRNA.719
  9. bip1
  10. SPAC22A12.17c
  11. SPAC22A12.16
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0002061inviable vegetative cell populationMicroscopymug84delta (deletion)deletionPMID:20473289
GO Molecular Function

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Term IDTerm NameEvidenceWith/FromReference
GO:0017176phosphatidylinositol N-acetylglucosaminyltransferase activity
contributes_toISSUniProtKB:P57054GO_REF:0000001
GO Biological Process

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Term IDTerm NameEvidenceWith/FromReference
GO:0006506GPI anchor biosynthetic processISSUniProtKB:P57054GO_REF:0000001
GO Cellular Component

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Term IDTerm NameEvidenceWith/FromReference
GO:0005783endoplasmic reticulumIDAPMID:16823372
ISOSGD:S000002845GO_REF:0000024
GO:0030176integral to endoplasmic reticulum membraneICGO:0005783, GO:0016020GO_REF:0000001
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
111801841181157

References

Region Start End Reference
three_prime_UTR11808421181157PMID:21511999
five_prime_UTR11801841180253PMID:21511999
three_prime_UTR11808421181157PMID:21511999
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF08510 IPR013717 Pfam PIG-P 80 177 1
TMhelix TMHMM 84 106 955
TMhelix TMHMM 121 143 955
PTHR21726:SF12 hmmpanther 30 194 1
PTHR21726 hmmpanther 30 194 1

View domain organization at Pfam

Sequence Ontology

Term IDTerm NameReference
SO:0000418signal_peptide
SO:0001812transmembrane_helix

Protein Properties

Ave. residue weight 114.17 Da
Charge -11.00
Isoelectric point 4.36
Molecular weight 22.26 kDa
Number of residues 195
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
expressed during meiosis PMID:16303567
protein levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000005,
PECO:0000014		population_widePMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide1.3PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.31PMID:23101633
Warning
DescriptionQualifierReference
gene structure updated PMID:21511999
Species Distribution
DescriptionQualifierReference
predominantly single copy (one to one)
conserved in fungi
conserved in eukaryotes
conserved in metazoa
conserved in vertebrates
conserved in eukaryotes only
Manually curated orthologous groups
SpeciesGeneDescription

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External References
Database Identifier Description
NBRP SPAC22A12.13 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC22A12.13 Retrieval of eukaryotic orthologs
BioGrid SPAC22A12.13 BioGRID Interaction Datasets
Bähler Lab SPAC22A12.13 Cell Cycle Expression Profile
Bähler Lab SPAC22A12.13 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC22A12.13 Pheromone response/mating expression profiles
Bähler Lab SPAC22A12.13 Environmental stress expression profiles
Bähler Lab SPAC22A12.13 Bähler Lab Transcriptome Viewer
Cyclebase SPAC22A12.13 Cell Cycle Data
PInt SPAC22A12.13 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPAC22A12.13 Entrez Gene
WikiGene2541722pig-P subunit (predicted)
Uniprot_genenameMUG84
EntrezGene2541722pig-P subunit (predicted)
SPD / RIKEN42/42B07Orfeome Localization Data
UniProtKB/SwissProtO13904Meiotically up-regulated gene 84 protein
ModBaseO13904Database of comparative protein structure models
Pfam Protein DomainsO13904Pfam Domain Arrangement
RefSeq PeptideNP_593243pig-P subunit (predicted)
RefSeq mRNANM_001018640972h- pig-P subunit (predicted) (mug84), mRNA
European Nucleotide ArchiveCAB16583ENA Protein Mapping
UniParcUPI000228F47AUniProt Archive

Literature for mug84
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013