SPAC22E12.02

Synonyms ChromosomeI
ProductRNA-binding protein Gene Start5021952
Feature Typeprotein coding Gene End5024151
Name Description CDS Start5022184
Characterisation Statusconserved_unknown CDS End5023077

Ensembl Gene Location
nup155 rmt1 rpl31 SPNCRNA.258 SPAC22E12.01 > SPAC22E12.02 < SPAC22E12.03c prl52 ccs1 rer1 gmh3 SPNCRNA.1043 rna1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
150219525022491
250227265024151

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00076 Pfam RNA recognition motif domain 32 101 70.1 70
54928 Superfamily 18 127 76.4 76
SM00360 Smart RNA recognition motif domain 31 103 87.3 69
PS50102 PROSITE RNA recognition motif domain 30 107 17.66 72

Protein Properties

Ave. residue weight 111.46 Da
Charge 20.00
Isoelectric point 10.98
Molecular weight 24.41 kDa
Number of residues 219
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0007126meiosisISS UniProtKB:Q9Y580GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0007126

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634

Protein Family

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DescriptionSourceAll Genes
rrm RNA recognition motifTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000302

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAC22E12.02 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC22E12.02 Retrieval of eukaryotic orthologs
BioGrid SPAC22E12.02 BioGRID Interaction Datasets
Bähler Lab SPAC22E12.02 Cell Cycle Expression Profile
Bähler Lab SPAC22E12.02 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC22E12.02 Pheromone response/mating expression profiles
Bähler Lab SPAC22E12.02 Environmental stress expression profiles
Bähler Lab SPAC22E12.02 Bähler Lab Transcriptome Viewer
Cyclebase SPAC22E12.02 Cell Cycle Data
Entrez Gene SPAC22E12.02 Link to Entrez Gene
SPD / RIKEN12/12B11Orfeome Localization Data
UniProtKB/SwissProtQ10355Uncharacterized RNA-binding protein C22E12.02
ArrayExpressQ10355Link to ArrayExpress
RefSeq PeptideNP_594828RNA-binding protein
RefSeq mRNANM_001020257972h- RNA-binding protein (SPAC22E12.02), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAA93889ENA Protein Mapping
UniParcUPI000013A8FFUniProt Archive

Literature for SPAC22E12.02

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Search: UK PMC or PubMed