snu23 (SPAC22F3.11c)

Synonyms ChromosomeI
ProductU4/U6 x U5 tri-snRNP complex subunit Snu23 (predicted) Gene Start682835
Feature Typeprotein coding Gene End683660
Name Description CDS Start682874
Characterisation Statusbiological_role_inferred CDS End683446

Ensembl Gene Location
tsc1 SPNCRNA.675 SPNCRNA.158 rgs1 > snu23 < gcs1 res2 rok1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1682835683034
2683102683109
3683160683660

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes

Protein Properties

Ave. residue weight 119.01 Da
Charge 16.00
Isoelectric point 10.87
Molecular weight 17.97 kDa
Number of residues 151
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0045292nuclear mRNA cis splicing, via spliceosomeISS SGD:S000002256GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0045292

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005816spindle pole bodyIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005816
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829
GO:0046540U4/U6 x U5 tri-snRNP complexISS SGD:S000002256GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0046540

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0008270zinc ion bindingIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0008270

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)] Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

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DescriptionSourceAll Genes
zf-C2H2 typeTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000153
zinc finger proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000137

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Physical Interactions from BioGRID

Gene Feature Evidence Source
dre4splicing associated factor Dre4 Affinity Capture-MS
saf3splicing associated factor Saf3 Affinity Capture-MS

External References

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Database Identifier Description
NBRP SPAC22F3.11c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC22F3.11c Retrieval of eukaryotic orthologs
BioGrid SPAC22F3.11c BioGRID Interaction Datasets
Bähler Lab SPAC22F3.11c Cell Cycle Expression Profile
Bähler Lab SPAC22F3.11c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC22F3.11c Pheromone response/mating expression profiles
Bähler Lab SPAC22F3.11c Environmental stress expression profiles
Bähler Lab SPAC22F3.11c Bähler Lab Transcriptome Viewer
Cyclebase SPAC22F3.11c Cell Cycle Data
Entrez Gene SPAC22F3.11c Link to Entrez Gene
SPD / RIKEN06/06A12Orfeome Localization Data
UniParcUPI0000139FCBUniProt Archive

Literature for snu23

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Search: UK PMC or PubMed