pst2 (SPAC23C11.15)


Gene Standard Namepst2 Characterisation Statuspublished
Systematic IDSPAC23C11.15 Feature Typeprotein coding
Synonyms Name Description
ProductClr6 histone deacetylase complex subunit Pst2 Product Size1075aa, 124.85 kDa
Genomic Location Chromosome I, 2160354-2164078 (3725nt); CDS:2160572-2163923 (3352nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0005515protein bindingIPIclr6PMID:12773392861
GO:0003714transcription corepressor activityISOSGD:S000005364GO_REF:000002412
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0006338chromatin remodelingICGO:0000118GO_REF:0000001157
GO:0006342chromatin silencingISOSGD:S000005364GO_REF:000002495
GO:0016575histone deacetylationIMPPMID:1277339224
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0032221Rpd3S complexIDAPMID:1904072016
IDAPMID:12773392
GO:0005634nucleusIDAPMID:168233722740
IDAPMID:12773392
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0001974increased number of cells with 1C DNA contentFlow cytometry datapst2ΔNullPECO:0000170, PECO:0000137, PECO:0000005PMID:2317367234
FYPO:0000268sensitive to UV during vegetative growthCell growth assaypst2ΔNullPECO:0000137, PECO:0000005PMID:23173672117
FYPO:0000095sensitive to bleomycinCell growth assaypst2ΔNullPECO:0000137, PECO:0000005PMID:2317367247
FYPO:0000085sensitive to camptothecinCell growth assaypst2ΔNullPECO:0000137, PECO:0000005PMID:23173672211
FYPO:0000088sensitive to hydroxyureaCell growth assaypst2ΔNullPECO:0000137, PECO:0000005PMID:23173672506
FYPO:0000089sensitive to methyl methanesulfonateCell growth assaypst2ΔNullPECO:0000137, PECO:0000005PMID:23173672210
FYPO:0000091sensitive to thiabendazoleCell growth assaypst2ΔNullPECO:0000137, PECO:0000005PMID:23173672164
FYPO:0002060viable vegetative cell populationMicroscopypst2ΔNullPMID:204732893760
not recorded (unrecorded)PMID:17450151
Microscopypst2ΔNullPECO:0000005, PECO:0000137PMID:23697806

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0001430abnormal mitotic cell cycle arrest with unreplicated DNAFlow cytometry datapst2ΔNullPECO:0000170, PECO:0000137, PECO:0000005PMID:2317367237
FYPO:0000708decreased mating efficiencyhigh throughput nucleotide sequencing assay evidencepst2ΔNullPECO:0000015PMID:23950735230
FYPO:0002177viable vegetative cell with normal cell morphology3086
penetrance FYPO_EXT:0000001Microscopypst2ΔNullPECO:0000005, PECO:0000137PMID:23697806
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
121603542160602
221606492160829
321609082164078

UTRs

Region Coordinates Reference
five_prime_UTR2160354..2160571PMID:21511999
three_prime_UTR2163924..2164078PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF08295 Pfam IPR013194 Histone deacetylase interacting 335 433 3
PF02671 Pfam IPR003822 Paired amphipathic helix 168 206 3
PF02671 Pfam IPR003822 Paired amphipathic helix 54 100 3
PF02671 Pfam IPR003822 Paired amphipathic helix 272 312 3
SM00761 SMART IPR013194 Histone deacetylase interacting 333 434 3
PS51477 Prosite Profiles IPR003822 Paired amphipathic helix 243 319 3
PS51477 Prosite Profiles IPR003822 Paired amphipathic helix 28 102 3
PS51477 Prosite Profiles IPR003822 Paired amphipathic helix 138 208 3
PTHR12346 HMMPANTHER 42 1052 3
PTHR12346:SF0 HMMPANTHER 42 1052 3
1g1eB00 Gene3D IPR003822 Paired amphipathic helix 41 101 3
1g1eB00 Gene3D IPR003822 Paired amphipathic helix 138 207 3
1g1eB00 Gene3D IPR003822 Paired amphipathic helix 255 312 3
SSF47762 SuperFamily IPR003822 Paired amphipathic helix 34 100 3
SSF47762 SuperFamily IPR003822 Paired amphipathic helix 254 313 3
SSF47762 SuperFamily IPR003822 Paired amphipathic helix 135 206 3

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceCount
PBO:0001382SIN3 family co-repressorTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0001382

Protein Properties

Ave. residue weight 116.14 Da
Charge 15.00
Isoelectric point 8.02
Molecular weight 124.85 kDa
Number of residues 1075
Modifications

Protein Modifications

Term IDTerm NameEvidenceResidueReferenceCount
MOD:00046O-phospho-L-serineS28PMID:217125471663
present during mitotic M phase
present during mitotic M phaseS687PMID:21712547
present during mitotic M phaseS641PMID:21712547
S643PMID:24763107
present during mitotic M phaseS643PMID:21712547
present during mitotic M phaseS881PMID:21712547
MOD:00047O-phospho-L-threonineT32PMID:21712547682
present during mitotic M phase
MOD:00696phosphorylated residueNASPMID:195477441915
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
2922during GO:0000087PECO:0000005,
PECO:0000126
mass spectrometry evidencePMID:24763107
827.21during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633
900.26during GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
3022during GO:0072690PECO:0000005,
PECO:0000126
mass spectrometry evidencePMID:24763107
2987during GO:0000084PECO:0000005,
PECO:0000126
mass spectrometry evidencePMID:24763107

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
2.4during GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
0.95during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633
Species Distribution
DescriptionQualifierReferenceCount
conserved in fungi4569
conserved in eukaryotes4482
conserved in metazoa3419
conserved in vertebrates3393
conserved in eukaryotes only2487
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
ubp11ubiquitin C-terminal hydrolase Ubp11 Negative GeneticPMID:22681890
gyp7GTPase activating protein Gyp7 (predicted) Negative GeneticPMID:22681890
rng9contractile ring myosin V regulator Rng9 Negative GeneticPMID:22681890
mca1transcription factor, zf-fungal binuclear cluster type Mca1 (predicted) Negative GeneticPMID:22681890
exg1glucan 1,6-beta-glucosidase Exg1 Negative GeneticPMID:22681890
sle1eisosome assembly protein Seg1 Negative GeneticPMID:22681890
clr5Clr5 protein Negative GeneticPMID:22681890
klp6kinesin-like protein Klp6 Negative GeneticPMID:22681890
rpl410160S ribosomal protein L41 Negative GeneticPMID:22681890
SPBC651.04sequence orphan Negative GeneticPMID:22681890
ers1RNA-silencing factor Ers1 Negative GeneticPMID:22681890
mpc1mitochondrial pyruvate transmembrane transporter subunit Mpc1 (predicted) Negative GeneticPMID:22681890
SPCC1442.14cadenosine 5'-monophosphoramidase (predicted) Negative GeneticPMID:22681890
SPCC16C4.106-phosphogluconolactonase (predicted) Negative GeneticPMID:22681890
ngg1SAGA complex subunit Ngg1 Phenotypic EnhancementPMID:19547744
nsk1Clp1-interacting protein Nsk1 Negative GeneticPMID:22681890
SPBC1348.12transcription factor (predicted) Negative GeneticPMID:22681890
spn2septin Spn2 Negative GeneticPMID:22681890
SPCP20C8.03pseudogene (predicted) Negative GeneticPMID:22681890
pac2cAMP-independent regulatory protein Pac2 Negative GeneticPMID:22681890
dph2diphthamide biosynthesis protein (predicted) Positive GeneticPMID:22681890
gdh1NADP-specific glutamate dehydrogenase Gdh1 (predicted) Negative GeneticPMID:22681890
rad2514-3-3 protein Rad25 Phenotypic EnhancementPMID:19547744
lys4homocitrate synthase Negative GeneticPMID:22681890
ash2Ash2-trithorax family protein Negative GeneticPMID:22681890
Phenotypic EnhancementPMID:19547744
gcn5SAGA complex histone acetyltransferase catalytic subunit Gcn5 Positive GeneticPMID:22681890
Phenotypic SuppressionPMID:19547744
SPBC577.11DUF3074 family protein Negative GeneticPMID:22681890
rap1telomere binding protein Rap1 Negative GeneticPMID:22681890
Phenotypic EnhancementPMID:19547744
SPCC569.04sequence orphan Negative GeneticPMID:22681890
SPBC8E4.05cfumarate lyase superfamily Negative GeneticPMID:22681890
SPAC1705.02human 4F5S homolog Negative GeneticPMID:22681890
rpl250260S ribosomal protein L25 (predicted) Negative GeneticPMID:22681890
SPAC30D11.14cRNA-binding protein (predicted) Negative GeneticPMID:22681890
SPAPB1A11.02esterase/lipase (predicted) Negative GeneticPMID:22681890
SPAC11D3.16csequence orphan Negative GeneticPMID:22681890
pzh1serine/threonine protein phosphatase Pzh1 Negative GeneticPMID:22681890
swc5Swr1 complex subunit Swc5 Phenotypic EnhancementPMID:19547744
psl1cyclin pho85 family Psl1 (predicted) Negative GeneticPMID:22681890
vht1vitamin H transporter Vht1 Negative GeneticPMID:22681890
SPBP16F5.05cribosome biogenesis protein Nop8 (predicted) Negative GeneticPMID:22681890
SPAC212.06cDNA helicase in rearranged telomeric region, truncated Negative GeneticPMID:22681890
atb2tubulin alpha 2 Negative GeneticPMID:22681890
SPAC23C4.09cDNA-binding TFAR19-related protein (predicted) Negative GeneticPMID:22681890
SPBC24C6.04delta-1-pyrroline-5-carboxylate dehydrogenase (predicted) Negative GeneticPMID:22681890
mug65spore wall assembly protein (predicted) Negative GeneticPMID:22681890
rga3Rho-type GTPase activating protein Rga3 Negative GeneticPMID:22681890
SPCC63.13DNAJ domain protein Negative GeneticPMID:22681890
pmt1tRNA methyltransferase Negative GeneticPMID:22681890
SPAC212.01cS. pombe specific DUF999 family protein 2 Negative GeneticPMID:22681890
SPCC576.01csulfonate dioxygenase (predicted) Negative GeneticPMID:22681890
fsv1SNARE Fsv1 Negative GeneticPMID:22681890
rga6Rho-type GTPase activating protein Rga6 (predicted) Negative GeneticPMID:22681890
mug113T5orf172 family protein Negative GeneticPMID:22681890
rsc1RSC complex subunit Rsc1 Phenotypic EnhancementPMID:19547744
alb1pre-60S shuttling factor Alb1 (predicted) Negative GeneticPMID:22681890
apm3AP-3 adaptor complex subunit Apm3 (predicted) Negative GeneticPMID:22681890
sum2G2/M transition checkpoint protein Sum2 Negative GeneticPMID:22681890
SPAC12G12.09conserved fungal protein Negative GeneticPMID:22681890
abc3ABC transporter Abc3, unknown specificity Negative GeneticPMID:22681890
git5heterotrimeric G protein beta subunit Git5 Positive GeneticPMID:22681890
ure2urease Ure2 Positive GeneticPMID:22681890
coq7ubiquinone biosynthesis protein Coq7 Phenotypic EnhancementPMID:19547744
SPCC613.03conserved fungal protein Negative GeneticPMID:22681890
ubc16ubiquitin conjugating enzyme Ubc16 (predicted) Negative GeneticPMID:22681890
SPCC61.05S. pombe specific multicopy membrane protein family 1 Negative GeneticPMID:22681890
lys12homoisocitrate dehydrogenase Lys12 Negative GeneticPMID:22681890
rps170140S ribosomal protein S17 (predicted) Negative GeneticPMID:22681890
SPAC186.06ER unfolded protein response protein (predicted) Negative GeneticPMID:22681890
SPAC139.01cnuclease, XP-G family (predicted) Negative GeneticPMID:22681890
hht2histone H3 h3.2 Phenotypic EnhancementPMID:19547744
gpd2glycerol-3-phosphate dehydrogenase Gpd2 Negative GeneticPMID:22681890
SPAC1A6.03cphospholipase (predicted) Negative GeneticPMID:22681890
SPCC1494.08cconserved fungal protein Negative GeneticPMID:22681890
gst1glutathione S-transferase Gst1 Negative GeneticPMID:22681890
Phenotypic EnhancementPMID:19547744
SPCC16C4.20cHMG box protein (predicted) Negative GeneticPMID:22681890
ckb2CK2 family regulatory subunit (predicted) Phenotypic SuppressionPMID:19547744
gmh5alpha-1,2-galactosyltransferase (predicted) Positive GeneticPMID:22681890
dcd1deoxycytidylate deaminase (predicted) Negative GeneticPMID:22681890
tma20RNA-binding protein Tma20 (predicted) Negative GeneticPMID:22681890
SPAC1687.09ENTH/VHS domain protein (predicted) Negative GeneticPMID:22681890
SPBC1773.03caminotransferase class-III, possible transaminase, unknown specificity Positive GeneticPMID:22681890
elp6elongator complex subunit Elp6 (predicted) Phenotypic EnhancementPMID:19547744
mgr2mitochondrial membrane protein Mgr2 (predicted) Negative GeneticPMID:22681890
cph1Clr6 histone deacetylase associated PHD protein-1 Cph1 Phenotypic SuppressionPMID:19547744
clr1cryptic loci regulator Clr1 Negative GeneticPMID:22681890
erf4palmitoyltransferase complex subunit Erf4 Negative GeneticPMID:22681890
SPCC777.02transcription factor (predicted) Negative GeneticPMID:22681890
caf5spermine family transmembrane transporter Caf5 Positive GeneticPMID:22681890
kap113karyopherin Kap113 Negative GeneticPMID:22681890
sif3Sad1 interacting factor Sif3 (predicted) Negative GeneticPMID:22681890
rps250240S ribosomal protein S25 (predicted) Positive GeneticPMID:22681890
tsc1hamartin Negative GeneticPMID:22681890
gma12alpha-1,2-galactosyltransferase Gma12 Positive GeneticPMID:22681890
Phenotypic SuppressionPMID:19547744
mug147sequence orphan Negative GeneticPMID:22681890
fma1methionine aminopeptidase Fma1 (predicted) Negative GeneticPMID:22681890
rpt419S proteasome regulatory subunit Rpt4 (predicted) Negative GeneticPMID:22681890
SPAC24H6.11csulfate transmembrane transporter (predicted) Negative GeneticPMID:22681890
fis1mitochondrial fission protein Fis1 (predicted) Negative GeneticPMID:22681890
rsv1transcription factor Rsv1 Phenotypic EnhancementPMID:19547744
grx3monothiol glutaredoxin Grx3 Negative GeneticPMID:22681890
ivn1CDC50 domain protein, implicated in signal transduction (predicted) Positive GeneticPMID:22681890
Phenotypic SuppressionPMID:19547744
tif512translation elongation factor eIF5A (predicted) Negative GeneticPMID:22681890
mpp6nuclear exosome-associated RNA binding protein Mpp6 Negative GeneticPMID:22681890
SPBC18A7.02cseven transmembrane receptor-like protein (predicted) Negative GeneticPMID:22681890
SPCC550.11karyopherin (predicted) Negative GeneticPMID:22681890
SPBCPT2R1.01cS. pombe specific DUF999 protein family 9 Negative GeneticPMID:22681890
SPAC922.04sequence orphan Negative GeneticPMID:22681890
pac10prefoldin subunit 3 Pac10 (predicted) Phenotypic EnhancementPMID:19547744
ptl1triacylglycerol lipase ptl1 Phenotypic SuppressionPMID:19547744
fhl1forkhead transcription factor Fhl1 Negative GeneticPMID:22681890
ctl1choline transmembrane transporter family protein Ctl1 Negative GeneticPMID:22681890
SPAC977.17MIP water channel (predicted) Negative GeneticPMID:22681890
SPBPB2B2.11nucleotide-sugar 4,6-dehydratase (predicted) Negative GeneticPMID:22681890
rev3DNA polymerase zeta catalytic subunit Rev3 (predicted) Negative GeneticPMID:22681890
ppk25serine/threonine protein kinase Ppk25 (predicted) Negative GeneticPMID:22681890
tim13TIM22 inner membrane protein import complex subunit Tim13 (predicted) Phenotypic EnhancementPMID:19547744
set1histone lysine methyltransferase Set1 Positive GeneticPMID:22681890
SPAC1805.14sequence orphan Negative GeneticPMID:22681890
trm8tRNA (guanine-N7-)-methyltransferase catalytic subunit Trm8 (predicted) Negative GeneticPMID:22681890
iwr1RNA polymerase II nuclear import protein Iwr1 (predicted) Negative GeneticPMID:22681890
zwf2glucose-6-phosphate 1-dehydrogenase Zwf2 (predicted) Negative GeneticPMID:22681890
scs7sphingosine hydroxylase Scs7 Negative GeneticPMID:22681890
SPBC16E9.02cCUE domain protein Phenotypic EnhancementPMID:19547744
aut12autophagy associated protein Aut12 (predicted) Phenotypic SuppressionPMID:19547744
SPAC22A12.17cshort chain dehydrogenase (predicted) Negative GeneticPMID:22681890
dlc1dynein light chain Dlc1 Negative GeneticPMID:22681890
mnl1alpha mannosidase Mnl1 (predicted) Positive GeneticPMID:22681890
SPBC21B10.08csequence orphan Negative GeneticPMID:22681890
clp1Cdc14-related protein phosphatase Clp1/Flp1 Negative GeneticPMID:22681890
SPAC869.05csulfate transporter (predicted) Negative GeneticPMID:22681890
SPAC9.02cpolyamine N-acetyltransferase (predicted) Negative GeneticPMID:22681890
vps13achorein homolog (predicted) Negative GeneticPMID:22681890
hmo1HMG box protein Hmo1 Phenotypic SuppressionPMID:19547744
spe1ornithine decarboxylase Spe1 (predicted) Negative GeneticPMID:22681890
mug94sequence orphan Negative GeneticPMID:22681890
SPAC186.08cL-lactate dehydrogenase (predicted) Negative GeneticPMID:22681890
mei2RNA-binding protein involved in meiosis Mei2 Positive GeneticPMID:22681890
SPAC1D4.01human C9orf78 ortholog Negative GeneticPMID:22681890
SPAC1071.09cDNAJ domain protein, DNAJC9 family (predicted) Negative GeneticPMID:22681890
SPBPB10D8.01cysteine transporter (predicted) Negative GeneticPMID:22681890
fin1serine/threonine protein kinase, NIMA related Fin1 Negative GeneticPMID:22681890
gti1gluconate transporter inducer Gti1 Negative GeneticPMID:22681890
cip2RNA-binding protein Cip2 Positive GeneticPMID:22681890
SPAC750.04cS. pombe specific 5Tm protein family Negative GeneticPMID:22681890
SPAC6F12.06Rho GDP dissociation inhibitor Rdi1 (predicted) Phenotypic EnhancementPMID:19547744
SPCC1442.11csequence orphan Negative GeneticPMID:22681890
ubc13ubiquitin conjugating enzyme Ubc13 Positive GeneticPMID:22681890
SPBPB2B2.07cS. pombe specific DUF999 protein family 7 Negative GeneticPMID:22681890
SPBC18A7.01X-Pro dipeptidase (predicted) Negative GeneticPMID:22681890
rpl280160S ribosomal protein L27/L28 Negative GeneticPMID:22681890
sut1alpha-glucoside transporter Sut1 Positive GeneticPMID:22681890
mug16UNC-50 family protein Negative GeneticPMID:22681890
cek1serine/threonine protein kinase Cek1 Negative GeneticPMID:22681890
alp31tubulin specific chaperone cofactor A, Alp31 Phenotypic EnhancementPMID:19547744
SPBC215.07cPWWP domain protein (predicted) Negative GeneticPMID:22681890
alg5dolichyl-phosphate beta-glucosyltransferase Alg5 (predicted) Phenotypic EnhancementPMID:19547744
uep1ribosomal-ubiquitin fusion protein Ubi2 Negative GeneticPMID:22681890
reb1RNA polymerase I transcription termination factor Reb1 Negative GeneticPMID:22681890
Phenotypic EnhancementPMID:19547744
SPBP35G2.14RNA-binding protein Negative GeneticPMID:22681890
nta1protein N-terminal amidase Nta1 (predicted) Negative GeneticPMID:22681890
SPBC29A10.16ccytochrome b5 (predicted) Negative GeneticPMID:22681890
pyp1tyrosine phosphatase Pyp1 Positive GeneticPMID:22681890
SPBC115.03gfo/idh/mocA family oxidoreductase (predicted) Negative GeneticPMID:22681890
rtn1reticulon-like protein Rtn1 Phenotypic EnhancementPMID:19547744
yap18ENTH/VHS domain protein (predicted) Negative GeneticPMID:22681890
upf1ATP-dependent RNA helicase Upf1 Negative GeneticPMID:22681890
mak10NatC N-acetyltransferase complex subunit Mak10 (predicted) Negative GeneticPMID:22681890
swc3Swr1 complex subunit Swc3 Negative GeneticPMID:22681890
thi5transcription factor Thi5 Negative GeneticPMID:22681890
SPBC2D10.04arrestin Aly1 related, implicated in endocytosis Positive GeneticPMID:22681890
SPBC25H2.03vacuolar protein involved in phosphoinositide metabolism (predicted) Negative GeneticPMID:22681890
ppk8serine/threonine protein kinase Ppk8 (predicted) Negative GeneticPMID:22681890
pmk1MAP kinase Pmk1 Negative GeneticPMID:22681890
SPACUNK4.10glyoxylate reductase (predicted) Negative GeneticPMID:22681890
sub1transcription coactivator PC4 Positive GeneticPMID:22681890
akr1palmitoyltransferase Akr1 (predicted) Phenotypic EnhancementPMID:19547744
SPCC1884.01sequence orphan Negative GeneticPMID:22681890
pho1acid phosphatase Pho1 Negative GeneticPMID:22681890
SPBC9B6.03zf-FYVE type zinc finger protein Negative GeneticPMID:22681890
SPCC24B10.16cproteasome assembly chaperone 4 (predicted) Negative GeneticPMID:22681890
ptr2PTR family peptide transporter Ptr2 Negative GeneticPMID:22681890
fio1iron transport multicopper oxidase Fio1 Negative GeneticPMID:22681890
ctu2cytosolic thiouridylase subunit Ctu2 Negative GeneticPMID:22681890
SPBC21B10.07glycosyl hydrolase family 16 (predicted) Negative GeneticPMID:22681890
SPAC222.08cglutamine aminotransferase subunit (predicted) Negative GeneticPMID:22681890
mis4adherin, cohesin loading factor Mis4 Negative GeneticPMID:23050226
qcr8ubiquinol-cytochrome-c reductase complex subunit 7 Negative GeneticPMID:22681890
ura1carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1 Negative GeneticPMID:22681890
mug121sequence orphan Negative GeneticPMID:22681890
sry1serine racemase Sry1 Negative GeneticPMID:22681890
SPCP20C8.02cS. pombe specific UPF0321 family protein 1 Negative GeneticPMID:22681890
glo1glyoxalase I Negative GeneticPMID:22681890
SPCC1020.05phosphoprotein phosphatase (predicted) Negative GeneticPMID:22681890
cis4cation diffusion family zinc membrane transporter Cis4 Negative GeneticPMID:22681890
Phenotypic EnhancementPMID:19547744
SPBC947.06cspermidine family transporter (predicted) Negative GeneticPMID:22681890
SPAC750.01aldo/keto reductase family protein Negative GeneticPMID:22681890
are2acyl-coA-sterol acyltransferase Are2 (predicted) Negative GeneticPMID:22681890
pop2F-box/WD repeat protein Pop2 Negative GeneticPMID:22681890
pub2HECT-type ubiquitin-protein ligase Pub2 Phenotypic EnhancementPMID:19547744
tht2meiotically upregulated gene Mug22 Positive GeneticPMID:22681890
ape2aminopeptidase Ape2 (predicted) Negative GeneticPMID:22681890
atg7E1 ubiquitin-like conjugating enzyme Atg7 Negative GeneticPMID:22681890
SPBC725.05cnucleotide pyrophosphatase (predicted) Negative GeneticPMID:22681890
cnp1centromere-specific histone H3 CENP-A Phenotypic EnhancementPMID:23028377
syn1synaptotagmin family C2 domain protein, Syn1 Negative GeneticPMID:22681890
rsv2transcription factor Rsv2 Phenotypic EnhancementPMID:19547744
SPBC106.13ubiquitin ligase complex subunit, involved in proteasome-dependent catabolite inactivation of FBPase (predicted) Negative GeneticPMID:22681890
iqw1WD repeat protein, Iqw1 Negative GeneticPMID:22681890
rec14Ski complex subunit Rec14 Phenotypic EnhancementPMID:19547744
SPBC1709.16caromatic ring-opening dioxygenase (predicted) Negative GeneticPMID:22681890
SPAC2H10.01transcription factor, zf-fungal binuclear cluster type (predicted) Negative GeneticPMID:22681890
SPAC24C9.12cglycine hydroxymethyltransferase (predicted) Negative GeneticPMID:22681890
rpl190260S ribosomal protein L19 Positive GeneticPMID:22681890
mex67mRNA export receptor, Tap, nucleoporin Mex67 Phenotypic SuppressionPMID:19547744
ppr2mitochondrial PPR repeat protein Ppr2 Negative GeneticPMID:22681890
atp12F1-ATPase chaperone Atp12 (predicted) Negative GeneticPMID:22681890
rad2FEN-1 endonuclease Rad2 Negative GeneticPMID:22681890
bio2biotin synthase Negative GeneticPMID:22681890
SPCC1235.01sequence orphan Negative GeneticPMID:22681890
ppk29Ark1/Prk1 family protein kinase Ppk29 Negative GeneticPMID:22681890
vac7Vac7 ortholog (predicted) Negative GeneticPMID:22681890
psh3ER chaperone SHR3 homologue Psh3 Negative GeneticPMID:22681890
snf59SWI/SNF complex subunit Snf59 Positive GeneticPMID:22681890
SPBC1348.02S. pombe specific 5Tm protein family Negative GeneticPMID:22681890
snt1Set3 complex subunit Snt1 Phenotypic SuppressionPMID:19547744
raf1CLRC ubiquitin E3 ligase complex specificiy factor Raf1/Dos1 Negative GeneticPMID:22681890
arg6acetylglutamate synthase Arg6 (predicted) Negative GeneticPMID:22681890
wos2p23 homolog, predicted co-chaperone Wos2 Negative GeneticPMID:22681890
zrg17cation diffusion family zinc membrane transporter Zrg17 Negative GeneticPMID:22681890
wis2cyclophilin family peptidyl-prolyl cis-trans isomerase Wis2 Phenotypic EnhancementPMID:19547744
SPBC6B1.03cPal1 family protein Negative GeneticPMID:22681890
ies4Ino80 complex subunit Ies4 Negative GeneticPMID:22681890
bqt4bouquet formation protein Bqt4 Negative GeneticPMID:22681890
abc4glutathione S-conjugate-exporting ATPase Abc4 Negative GeneticPMID:22681890
rps40140S ribosomal protein S4 (predicted) Negative GeneticPMID:22681890
SPBPB2B2.17cS. pombe specific 5Tm protein family Negative GeneticPMID:22681890
SPAC26H5.07cseven transmembrane receptor protein (predicted) Negative GeneticPMID:22681890
SPAP8A3.07cphospho-2-dehydro-3-deoxyheptonate aldolase (predicted) Negative GeneticPMID:22681890
SPBC25B2.10Usp (universal stress protein) family protein Negative GeneticPMID:22681890
frp2ferric-chelate reductase Frp2 (predicted) Negative GeneticPMID:22681890
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
alp13MRG family Clr6 histone deacetylase complex subunit Alp13 Affinity Capture-WesternPMID:12773392
clr6histone deacetylase (class I) Clr6 Affinity Capture-WesternPMID:12773392
prw1Clr6 histone deacetylase complex subunit Prw1 Affinity Capture-WesternPMID:12773392
External References
Database Identifier Description
NBRP SPAC23C11.15 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC23C11.15 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPAC23C11.15 BioGRID Interaction Datasets
Expression Viewer SPAC23C11.15 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPAC23C11.15 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPAC23C11.15 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPAC23C11.15 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPAC23C11.15 Polyadenylation Viewer (Gullerova lab)
pombeTV SPAC23C11.15 Transcriptome Viewer (Bähler Lab)
Cyclebase SPAC23C11.15 Cell Cycle Data
GEO SPAC23C11.15 GEO profiles
PInt SPAC23C11.15 Protein-Protein Interaction Predictor (Bähler Lab)
WikiGene2541624Clr6 histone deacetylase complex subunit Pst2
EntrezGene2541624Clr6 histone deacetylase complex subunit Pst2
SPD / RIKEN48/48C01Orfeome Localization Data
UniProtKB/SwissProtO13919Paired amphipathic helix protein pst2
ModBaseO13919Database of comparative protein structure models
STRINGO13919Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_593646Clr6 histone deacetylase complex subunit Pst2
RefSeq mRNANM_001019077972h- Clr6 histone deacetylase complex subunit Pst2 (pst2), mRNA
European Nucleotide ArchiveCAB11171ENA Protein Mapping
European Nucleotide ArchiveCAB11171.1ENA Protein Mapping
UniParcUPI000013281CUniProt Archive

Literature for pst2

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Release Version: PomBase:22_44 - 08 Jul 2014