SPAC23H3.04

Synonyms ChromosomeI
Productconserved fungal protein Gene Start2499035
Feature Typeprotein coding Gene End2500236
Name Description CDS Start2499035
Characterisation Statusconserved_unknown CDS End2500236

Ensembl Gene Location
sec73 ini1 npr2 SPNCRNA.558 SPNCRNA.830 > SPAC23H3.04 < swd1 apl6 mrp2 bub3
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
124990352499159
224991612499353
324994432499824
424998752500236

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
TMHMM tmhmm Double transmembrane domain 38 60 0.99872 1312
TMHMM tmhmm Double transmembrane domain 74 94 0.99951 1312
TMHMM tmhmm Double transmembrane domain 104 124 0.99188 1312
TMHMM tmhmm Double transmembrane domain 173 192 0.99755 1312
TMHMM tmhmm Double transmembrane domain 222 244 0.95792 1312
TMHMM tmhmm Double transmembrane domain 250 270 0.99665 1312
TMHMM tmhmm Double transmembrane domain 280 298 0.9909 1312
TMHMM tmhmm Double transmembrane domain 319 340 0.99748 1312

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000073protein transmembrane helicesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000073

Protein Properties

Ave. residue weight 115.25 Da
Charge 11.50
Isoelectric point 8.88
Molecular weight 40.68 kDa
Number of residues 353
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

 Contact Curators | Back to Top
Cellular Component
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005794Golgi apparatusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005794

Warning

 Contact Curators | Back to Top
DescriptionSourceAll Genes
frameshifted Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000108
sequence error in genomic data Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000129
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
conserved in Fungi onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000056
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPAC23H3.04 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC23H3.04 Retrieval of eukaryotic orthologs
BioGrid SPAC23H3.04 BioGRID Interaction Datasets
Bähler Lab SPAC23H3.04 Cell Cycle Expression Profile
Bähler Lab SPAC23H3.04 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC23H3.04 Pheromone response/mating expression profiles
Bähler Lab SPAC23H3.04 Environmental stress expression profiles
Bähler Lab SPAC23H3.04 Bähler Lab Transcriptome Viewer
Cyclebase SPAC23H3.04 Cell Cycle Data
Entrez Gene SPAC23H3.04 Link to Entrez Gene
SPD / RIKEN19/19C03Orfeome Localization Data
UniProtKB/SwissProtO13938UPF0658 Golgi apparatus membrane protein C23H3.04
ArrayExpressO13938Link to ArrayExpress
RefSeq PeptideNP_593794conserved fungal protein
RefSeq mRNANM_001019223972h- conserved fungal protein (SPAC23H3.04), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB16233ENA Protein Mapping
UniParcUPI0001B0626AUniProt Archive

Literature for SPAC23H3.04

 Contact Curators | Back to Top
Search: UK PMC or PubMed