SPAC26H5.02c

Synonyms ChromosomeI
ProductDNA replication ATPase (predicted) Gene Start4119311
Feature Typeprotein coding Gene End4117195
Name Description CDS Start4118973
Characterisation Statusbiological_role_inferred CDS End4117287

Ensembl Gene Location
SPAC23A1.17 mrp51 SPAC23A1.19c > SPAC26H5.02c < pcf2 SPNCRNA.959 SPAC26H5.04 SPNCRNA.960 SPAC26H5.05
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
141193114118382
241183384118308
341182624118245
441182004117426
541173854117195

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF12002 Pfam MgsA AAA+ ATPase C-terminal 334 497 196.2 1
PF00004 Pfam ATPase, AAA-type, core 123 232 55.2 35
52540 Superfamily 76 310 142.7 295
SM00382 Smart AAA+ ATPase domain 119 236 53.9 73
SM00734 Smart Zinc finger, Rad18-type putative 6 29 43.3 2


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:01148ubiquitinylated lysineTemporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:01148
MOD:01149sumoylated lysineTemporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:01149

Protein Properties

Ave. residue weight 111.72 Da
Charge 10.00
Isoelectric point 8.26
Molecular weight 56.31 kDa
Number of residues 504
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

 Contact Curators | Back to Top
Biological Process
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000731DNA synthesis involved in DNA repairISS UniProtKB:Q96S55GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000731
GO:0033567DNA replication, Okazaki fragment processingISS SGD:S000005162GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0033567

Cellular Component
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusISS SGD:S000005162GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634

Molecular Function
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005524ATP bindingIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005524
IEAGO_REF:0000004
GO:0043142single-stranded DNA-dependent ATPase activityISS SGD:S000005162GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0043142

Warning

 Contact Curators | Back to Top
DescriptionSourceAll Genes
gene structure updatedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

 Contact Curators | Back to Top
DescriptionSourceAll Genes
AAA family ATPaseTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000539

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

 Contact Curators | Back to Top
SpeciesGeneDescription

Interactions

Contact Curators | Back to Top

Genetic Interactions from BioGRID

Gene Feature Evidence Source
hip1hira protein, histone chaperone Hip1 Positive Genetic


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPAC26H5.02c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC26H5.02c Retrieval of eukaryotic orthologs
BioGrid SPAC26H5.02c BioGRID Interaction Datasets
Bähler Lab SPAC26H5.02c Cell Cycle Expression Profile
Bähler Lab SPAC26H5.02c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC26H5.02c Pheromone response/mating expression profiles
Bähler Lab SPAC26H5.02c Environmental stress expression profiles
Bähler Lab SPAC26H5.02c Bähler Lab Transcriptome Viewer
Cyclebase SPAC26H5.02c Cell Cycle Data
Entrez Gene SPAC26H5.02c Link to Entrez Gene
SPD / RIKEN26/26A03Orfeome Localization Data
UniProtKB/SwissProtO13984ATPase WRNIP1 homolog C26H5.02c
ArrayExpressO13984Link to ArrayExpress
RefSeq PeptideNP_594449DNA replication ATPase
RefSeq mRNANM_001019878972h- DNA replication ATPase (SPAC26H5.02c), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB16188ENA Protein Mapping
UniParcUPI0000509A77UniProt Archive

Literature for SPAC26H5.02c

 Contact Curators | Back to Top
Search: UK PMC or PubMed