but1 (SPAC27D7.12c)

Synonyms SPAC27D7.12, mug107 ChromosomeI
Productneddylation pathway protein But1 Gene Start4534385
Feature Typeprotein coding Gene End4533326
Name DescriptionMeiotically Upregulated Gene CDS Start4534248
Characterisation Statuspublished CDS End4533517

Ensembl Gene Location
SPAC27D7.11c SPNCRNA.995 SPNCRNA.248 SPNCRNA.996 SPATRNAASP.01 > but1 < ssm4 tpr1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
145343854533326

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00578 Pfam Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant 126 206 33.7 3
52833 Superfamily 124 230 26.9 38
TMHMM tmhmm Double transmembrane domain 100 119 0.62123 1312

Protein Properties

Ave. residue weight 112.83 Da
Charge 4.50
Isoelectric point 7.53
Molecular weight 27.42 kDa
Number of residues 243
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viable
Temporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
IDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year reference
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005515protein bindingIPI uba3 | but2Temporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005515

Gene Expression

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DescriptionSourceAll Genes
expressed during meiosis Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000123

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

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DescriptionSourceAll Genes
thioredoxin familyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000261

Species Distribution

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DescriptionSourceAll Genes
orthologs cannot be distinguishedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000110

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
srb11cyclin CycC, Srb mediator subunit Srb11 Positive Genetic
amo1nuclear rim protein Amo1 Positive Genetic
dsc3conserved fungal protein Negative Genetic
swd2Set1C complex subunit Swd2.1 Negative Genetic
shk2PAK-related kinase Shk2 Positive Genetic
ned8ubiquitin-like protein modifier Ned8 Phenotypic Enhancement
cph1Clr6 histone deacetylase associated PHD protein-1 Cph1 Positive Genetic

Physical Interactions from BioGRID

Gene Feature Evidence Source
but2But2 family protein But2 Two-hybrid
uba3NEDD8 activating enzyme Two-hybrid

External References

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Database Identifier Description
NBRP SPAC27D7.12c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC27D7.12c Retrieval of eukaryotic orthologs
BioGrid SPAC27D7.12c BioGRID Interaction Datasets
Bähler Lab SPAC27D7.12c Cell Cycle Expression Profile
Bähler Lab SPAC27D7.12c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC27D7.12c Pheromone response/mating expression profiles
Bähler Lab SPAC27D7.12c Environmental stress expression profiles
Bähler Lab SPAC27D7.12c Bähler Lab Transcriptome Viewer
Cyclebase SPAC27D7.12c Cell Cycle Data
Entrez Gene SPAC27D7.12c Link to Entrez Gene
SPD / RIKEN08/08G09Orfeome Localization Data
UniProtKB/SwissProtO42666Uba3-binding protein but1
ArrayExpressO42666Link to ArrayExpress
RefSeq PeptideNP_001018283neddylation pathway protein But1
RefSeq mRNANM_001020046972h- neddylation pathway protein But1 (but1), mRNA
European Nucleotide ArchiveBR000027ENA EMBL mapping
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveDQ104735ENA EMBL mapping
European Nucleotide ArchiveAAZ16240ENA Protein Mapping
European Nucleotide ArchiveCAF02013ENA Protein Mapping
European Nucleotide ArchiveFAA00001ENA Protein Mapping
UniParcUPI000017B1E3UniProt Archive

Literature for but1

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Search: UK PMC or PubMed