SPAC29A4.03c

Synonyms ChromosomeI
Productmitochondrial ribosomal protein subunit Mrps9 (predicted) Gene Start5142407
Feature Typeprotein coding Gene End5143810
Name Description CDS Start5142407
Characterisation Statusbiological_role_inferred CDS End5143224

Ensembl Gene Location
srb6 SPAC29A4.06c SPNCRNA.1050 cam2 SPNCRNA.1051 cbf5 > SPAC29A4.03c < SPAC29A4.02c snoR38 aif1 snoR56 lrs1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
151424075142628
251426315143810

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00380 Pfam Ribosomal protein S9 151 271 120.9 3
54211 Superfamily 145 271 135.1 29
PS00360 scanprosite Ribosomal protein S9 210 228 3

Protein Properties

Ave. residue weight 114.62 Da
Charge 32.00
Isoelectric point 10.70
Molecular weight 31.06 kDa
Number of residues 271
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006412translationISS UniProtKB:P38120GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006412

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005739mitochondrionIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005739
GO:0005763mitochondrial small ribosomal subunitISS UniProtKB:P38120GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005763

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0003735structural constituent of ribosomeISS UniProtKB:P38120GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0003735
IEAGO_REF:0000002

Warning

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DescriptionSourceAll Genes
frameshiftedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000108
sequence error in genomic dataTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000129
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
conserved in BacteriaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000086
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Physical Interactions from BioGRID

Gene Feature Evidence Source
stc1LIM-like protein linking chromatin modification to RNAi, Stc1 Affinity Capture-MS

External References

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Database Identifier Description
NBRP SPAC29A4.03c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC29A4.03c Retrieval of eukaryotic orthologs
BioGrid SPAC29A4.03c BioGRID Interaction Datasets
Bähler Lab SPAC29A4.03c Cell Cycle Expression Profile
Bähler Lab SPAC29A4.03c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC29A4.03c Pheromone response/mating expression profiles
Bähler Lab SPAC29A4.03c Environmental stress expression profiles
Bähler Lab SPAC29A4.03c Bähler Lab Transcriptome Viewer
Cyclebase SPAC29A4.03c Cell Cycle Data
Entrez Gene SPAC29A4.03c Link to Entrez Gene
SPD / RIKEN03/03A08Orfeome Localization Data
UniProtKB/SwissProtO1400640S ribosomal protein S9, mitochondrial
ArrayExpressO14006Link to ArrayExpress
RefSeq PeptideNP_594879mitochondrial ribosomal protein subunit S9
RefSeq mRNANM_001020308972h- mitochondrial ribosomal protein subunit S9 (SPAC29A4.03c), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB10130ENA Protein Mapping
UniParcUPI000228F48DUniProt Archive

Literature for SPAC29A4.03c

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Search: UK PMC or PubMed