SPAC29A4.06c

Synonyms ChromosomeI
Producthuman CCDC55 ortholog Gene Start5136040
Feature Typeprotein coding Gene End5137368
Name Description CDS Start5136167
Characterisation Statusconserved_unknown CDS End5137276

Ensembl Gene Location
SPNCRNA.1049 rrn5 SPAC29A4.09 prp19 srb6 > SPAC29A4.06c < SPNCRNA.1050 cam2 SPNCRNA.1051 cbf5 SPAC29A4.03c SPAC29A4.02c snoR38
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
151360405136362
251364055137368

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF09745 Pfam Domain of unknown function DUF2040 51 173 106.9 1

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000288coiled-coilTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000288

Protein Properties

Ave. residue weight 115.52 Da
Charge 13.50
Isoelectric point 9.89
Molecular weight 41.01 kDa
Number of residues 355
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAC29A4.06c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC29A4.06c Retrieval of eukaryotic orthologs
BioGrid SPAC29A4.06c BioGRID Interaction Datasets
Bähler Lab SPAC29A4.06c Cell Cycle Expression Profile
Bähler Lab SPAC29A4.06c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC29A4.06c Pheromone response/mating expression profiles
Bähler Lab SPAC29A4.06c Environmental stress expression profiles
Bähler Lab SPAC29A4.06c Bähler Lab Transcriptome Viewer
Cyclebase SPAC29A4.06c Cell Cycle Data
Entrez Gene SPAC29A4.06c Link to Entrez Gene
SPD / RIKEN17/17E01Orfeome Localization Data
UniProtKB/SwissProtO14009Nuclear speckle splicing regulatory protein 1 homolog
ArrayExpressO14009Link to ArrayExpress
RefSeq PeptideNP_594876hypothetical protein SPAC29A4.06c
RefSeq mRNANM_001020305972h- hypothetical protein (SPAC29A4.06c), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB10133ENA Protein Mapping
UniParcUPI000013AA0FUniProt Archive

Literature for SPAC29A4.06c

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Search: UK PMC or PubMed