SPAC29B12.08

Synonyms ChromosomeI
Productsequence orphan Gene Start5427297
Feature Typeprotein coding Gene End5431523
Name Description CDS Start5428407
Characterisation Statussequence_orphan CDS End5431072

Ensembl Gene Location
sec16 SPNCRNA.1082 SPNCRNA.270 SPNCRNA.1083 > SPAC29B12.08 < pgt1 SPAC29B12.11c
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
154272975428522
254291195431523

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes

Protein Properties

Ave. residue weight 109.84 Da
Charge 14.50
Isoelectric point 7.39
Molecular weight 75.68 kDa
Number of residues 689
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005737cytoplasmIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
sequence orphan, uncharacterisedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000077
identified in S. pombe onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000067
no apparent orthologsTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000078
sequence orphanTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000076

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
swi6chromodomain protein Swi6 Phenotypic Enhancement
clr3histone deacetylase (class II) Clr3 Phenotypic Enhancement
dsc3conserved fungal protein Negative Genetic
clr4histone H3 methyltransferase Clr4 Phenotypic Enhancement


External References

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Database Identifier Description
NBRP SPAC29B12.08 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC29B12.08 Retrieval of eukaryotic orthologs
BioGrid SPAC29B12.08 BioGRID Interaction Datasets
Bähler Lab SPAC29B12.08 Cell Cycle Expression Profile
Bähler Lab SPAC29B12.08 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC29B12.08 Pheromone response/mating expression profiles
Bähler Lab SPAC29B12.08 Environmental stress expression profiles
Bähler Lab SPAC29B12.08 Bähler Lab Transcriptome Viewer
Cyclebase SPAC29B12.08 Cell Cycle Data
Entrez Gene SPAC29B12.08 Link to Entrez Gene
SPD / RIKEN34/34F07Orfeome Localization Data
UniProtKB/SwissProtO14030Uncharacterized protein C29B12.08
ArrayExpressO14030Link to ArrayExpress
RefSeq PeptideNP_594986sequence orphan
RefSeq mRNANM_001020417972h- sequence orphan (SPAC29B12.08), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB16253ENA Protein Mapping
UniParcUPI000228F459UniProt Archive

Literature for SPAC29B12.08

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Search: UK PMC or PubMed