uso1 (SPAC29E6.03c)

SynonymsSPAC30.07c ChromosomeI
ProductER to Golgi tethering factor Uso1 (predicted) Gene Start4409338
Feature Typeprotein coding Gene End4405990
Name Description CDS Start4409338
Characterisation Statusbiological_role_inferred CDS End4405990

Ensembl Gene Location
abc4 SPNCRNA.984 SPNCRNA.246 SPNCRNA.985 pof11 prp3 > uso1 < SPAC29E6.05c nnf1 SPAC29E6.06c SPAC29E6.07
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
144093384409171
244090964407447
344073754405990

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04869 Pfam Vesicle tethering protein Uso1/P115-like , head domain 337 636 253.9 1
PF10363 Pfam 160 232 11 2
48371 Superfamily 59 538 73.1 119

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000288coiled-coilTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000288

Protein Properties

Ave. residue weight 113.94 Da
Charge -42.00
Isoelectric point 4.67
Molecular weight 121.58 kDa
Number of residues 1067
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006886intracellular protein transportIC GO:0006888GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006886
GO:0006888ER to Golgi vesicle-mediated transportISS SGD:S000002216GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006888
GO:0035493SNARE complex assemblyISS SGD:S000002216GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0035493
GO:0048280vesicle fusion with Golgi apparatusIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0048280

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0012507ER to Golgi transport vesicle membraneISS SGD:S000002216GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0012507

Protein Family

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DescriptionSourceAll Genes
armadillo repeat proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0002380

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAC29E6.03c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC29E6.03c Retrieval of eukaryotic orthologs
BioGrid SPAC29E6.03c BioGRID Interaction Datasets
Bähler Lab SPAC29E6.03c Cell Cycle Expression Profile
Bähler Lab SPAC29E6.03c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC29E6.03c Pheromone response/mating expression profiles
Bähler Lab SPAC29E6.03c Environmental stress expression profiles
Bähler Lab SPAC29E6.03c Bähler Lab Transcriptome Viewer
Cyclebase SPAC29E6.03c Cell Cycle Data
Entrez Gene SPAC29E6.03c Link to Entrez Gene
SPD / RIKEN48/48D02Orfeome Localization Data
UniProtKB/SwissProtQ09857Uncharacterized protein C29E6.03c
ArrayExpressQ09857Link to ArrayExpress
RefSeq PeptideNP_594561ER to Golgi tethering factor Uso1 (predicted)
RefSeq mRNANM_001019990972h- ER to Golgi tethering factor Uso1 (predicted) (uso1), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveZ66525ENA EMBL mapping
European Nucleotide ArchiveCAA91425ENA Protein Mapping
European Nucleotide ArchiveCAB66466ENA Protein Mapping
UniParcUPI0001B06250UniProt Archive

Literature for uso1

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Search: UK PMC or PubMed