nnf1 (SPAC29E6.04)

SynonymsSPAC30.08 ChromosomeI
Productkinetochore protein Nnf1 Gene Start4409773
Feature Typeprotein coding Gene End4410391
Name Description CDS Start4409773
Characterisation Statuspublished CDS End4410391

Ensembl Gene Location
pof11 prp3 uso1 SPAC29E6.05c > nnf1 < SPAC29E6.06c SPAC29E6.07 tbp1 SPAC29E6.09
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
144097734410192
244101944410391

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF03980 Pfam Nnf1 39 143 96.6 1
PIRSF027153 PIRSF Kinetochore-associated protein Nnf1p 1 189 249.5 1

Protein Properties

Ave. residue weight 115.68 Da
Charge -4.50
Isoelectric point 5.40
Molecular weight 23.71 kDa
Number of residues 205
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000279formation of azygotic asci upon sporulationTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000279
FYPO:0000121abnormal sporulationTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000121
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0007126meiosisIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0007126
GO:0019236response to pheromoneIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0019236

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000779condensed chromosome, centromeric regionIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000779
GO:0000818nuclear MIS12/MIND type complexTASGO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000818
GO:0005634nucleusIC GO:0031617GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0031617NMS complexIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0031617

Warning

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DescriptionSourceAll Genes
frameshiftedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000108
sequence error in genomic data Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000129

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
mis12kinetochore protein Mis12 Dosage Rescue
hos2histone deacetylase (class I) Hos2 Dosage Rescue
mis14kinetochore protein Mis14 Dosage Rescue

Physical Interactions from BioGRID

Gene Feature Evidence Source
spc7kinetochore protein Spc7 Affinity Capture-MS
mis12kinetochore protein Mis12 Affinity Capture-MS
nuf2spindle pole body protein Nuf2 Affinity Capture-MS

External References

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Database Identifier Description
NBRP SPAC29E6.04 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC29E6.04 Retrieval of eukaryotic orthologs
BioGrid SPAC29E6.04 BioGRID Interaction Datasets
Bähler Lab SPAC29E6.04 Cell Cycle Expression Profile
Bähler Lab SPAC29E6.04 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC29E6.04 Pheromone response/mating expression profiles
Bähler Lab SPAC29E6.04 Environmental stress expression profiles
Bähler Lab SPAC29E6.04 Bähler Lab Transcriptome Viewer
Cyclebase SPAC29E6.04 Cell Cycle Data
Entrez Gene SPAC29E6.04 Link to Entrez Gene
SPD / RIKEN03/03G04Orfeome Localization Data
UniProtKB/SwissProtQ09858Kinetochore protein nnf1
ArrayExpressQ09858Link to ArrayExpress
RefSeq PeptideNP_594562kinetochore protein Nnf1
RefSeq mRNANM_001019991972h- kinetochore protein Nnf1 (nnf1), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveZ66525ENA EMBL mapping
European Nucleotide ArchiveCAA91426ENA Protein Mapping
European Nucleotide ArchiveCAB66467ENA Protein Mapping
UniParcUPI0001577A48UniProt Archive

Literature for nnf1

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Search: UK PMC or PubMed