SPAC2F3.18c

Synonyms ChromosomeI
Productribonuclease kappa ortholog (predicted) Gene Start3942965
Feature Typeprotein coding Gene End3942040
Name Description CDS Start3942802
Characterisation Statusbiological_role_inferred CDS End3942299

Ensembl Gene Location
sut1 SPAC2F3.07c SPNCRNA.949 SPNCRNA.950 hem1 > SPAC2F3.18c < vps54 SPAC2F3.11 SPAC2F3.13c plp1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
139429653942775
239426693942506
339423643942040

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
TMHMM tmhmm Double transmembrane domain 15 33 0.99944 1312
TMHMM tmhmm Double transmembrane domain 56 76 0.99211 1312
SIGNALP_EUK Signalp 1 35 0 456

Protein Properties

Ave. residue weight 106.97 Da
Charge 4.50
Isoelectric point 9.31
Molecular weight 9.09 kDa
Number of residues 85
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0009303rRNA transcriptionISS UniProtKB:Q6P5S7GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0009303

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005783endoplasmic reticulumIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005783

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0004521endoribonuclease activityISS UniProtKB:Q6P5S7GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0004521

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAC2F3.18c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC2F3.18c Retrieval of eukaryotic orthologs
BioGrid SPAC2F3.18c BioGRID Interaction Datasets
Bähler Lab SPAC2F3.18c Cell Cycle Expression Profile
Bähler Lab SPAC2F3.18c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC2F3.18c Pheromone response/mating expression profiles
Bähler Lab SPAC2F3.18c Environmental stress expression profiles
Bähler Lab SPAC2F3.18c Bähler Lab Transcriptome Viewer
Cyclebase SPAC2F3.18c Cell Cycle Data
Entrez Gene SPAC2F3.18c Link to Entrez Gene
SPD / RIKEN51/51G08Orfeome Localization Data
UniProtKB/SwissProtQ8NIQ1Uncharacterized membrane protein C2F3.18c
ArrayExpressQ8NIQ1Link to ArrayExpress
RefSeq PeptideNP_001018267conserved protein
RefSeq mRNANM_001019810972h- conserved protein (SPAC2F3.18c), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAD43411ENA Protein Mapping
UniParcUPI000228F37DUniProt Archive

Literature for SPAC2F3.18c

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Search: UK PMC or PubMed