rad55 (SPAC3C7.03c)


Gene Standard Namerad55 Characterisation Statuspublished
Systematic IDSPAC3C7.03c Feature Typeprotein coding
Synonymsrhp55 Name Description
ProductRecA family ATPase Rad55/Rhp55 Product Size350aa, 39.00 kDa
Genomic Location Chromosome I, 2067904-2066442 (1463nt); CDS:2067764-2066668 (1097nt)

Ensembl Gene Location
GO Molecular Function
Term NameCount
ATP binding558
Annotation ExtensionEvidenceWith/FromReference
protein-DNA loading ATPase activity15
Annotation ExtensionEvidenceWith/FromReference
single-stranded DNA binding28
Annotation ExtensionEvidenceWith/FromReference
GO Biological Process
Term NameCount
cellular response to DNA damage stimulus210
Annotation ExtensionEvidenceWith/FromReference
DNA recombinase assembly6
Annotation ExtensionEvidenceWith/FromReference
double-strand break repair via homologous recombination36
Annotation ExtensionEvidenceWith/FromReference
meiotic joint molecule formation5
Annotation ExtensionEvidenceWith/FromReference
reciprocal meiotic recombination39
Annotation ExtensionEvidenceWith/FromReference
strand invasion7
Annotation ExtensionEvidenceWith/FromReference
GO Cellular Component
Term NameCount
cytosol2314
Annotation ExtensionEvidenceWith/FromReference
nucleus2695
Annotation ExtensionEvidenceWith/FromReference
Rhp55-Rhp57 complex2
Annotation ExtensionEvidenceWith/FromReference
site of double-strand break46
Annotation ExtensionEvidenceWith/FromReference
Fission Yeast Phenotype Ontology
Gene Deletion Viability: Viable

Population Phenotype

Term NameAlleleExpressionCount
decreased cell population growth at low temperaturerad55ΔNull61
increased number of cells with 1C DNA contentrad55ΔNull40
normal vegetative cell population growthrad55ΔNull738
sensitive to 4-nitroquinoline N-oxiderad55ΔNull159
sensitive to bleomycinrad55ΔNull75
sensitive to bortezomibrad55ΔNull256
sensitive to camptothecinrad55ΔNull225
sensitive to doxorubicinrad55ΔNull91
sensitive to hydroxyurearad55ΔNull534
sensitive to ionizing radiationrad55ΔNull60
sensitive to methyl methanesulfonaterad55ΔNull239
sensitive to thiabendazolerad55ΔNull218
sensitive to UV during vegetative growthrad55ΔNull141
viable vegetative cell populationrad55ΔNull3809

Cell Phenotype

Term NameAlleleExpressionCount
abnormal microtubule cytoskeleton morphology during mitotic interphaserad55ΔNull186
abnormal mitotic cell cyclerad55ΔNull831
abnormal mitotic cell cycle arrest with unreplicated DNArad55ΔNull50
abnormal nuclear morphology during vegetative growthrad55ΔNull63
decreased intergenic meiotic recombinationrad55ΔNull17
decreased sporulationrad55ΔNull72
DNA content increased during vegetative growthrad55ΔNull20
elongated vegetative cellrad55ΔNull761
inviable sporerad55ΔNull472
normal S-phase DNA damage checkpointrad55ΔNull18
viable elongated vegetative cellrad55ΔNull300
viable vegetative cellrad55ΔNull3636
viable vegetative cell with abnormal cell shaperad55ΔNull482
Target Of
OntologyRelationshipGeneProduct
FYPO affected by mutation in dbl1 double strand break localizing Dbl1
Transcript
Ensembl transcript structure with UTRs, exons and introns

Transcript Structure

Region Coordinates Reference
Exons2067904..2067749, 2067704..2066442
Introns2067748..2067705
mRNA2067904..2066442
5' UTR2067904..2067765AF053410
CDS2067764..2067749, 2067704..2066668
3' UTR2066667..2066442AF053410
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00154 Pfam IPR013765 DNA recombination and repair protein RecA 29 80 1
PS50162 Prosite Profiles IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain 21 249 4
PTHR13682:SF8 HMMPANTHER 9 349 1
PTHR13682 HMMPANTHER 9 349 1
3.40.50.300 Gene3D IPR027417 P-loop containing nucleoside triphosphate hydrolase 29 160 288
3.40.50.300 Gene3D IPR027417 P-loop containing nucleoside triphosphate hydrolase 214 331 288
SSF52540 SuperFamily IPR027417 P-loop containing nucleoside triphosphate hydrolase 25 170 294

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceCount
PBO:0000539AAA family ATPaseTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000539
PBO:0001319RecA familyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0001319
PBO:0001320helix-hairpin-helixTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0001320

Protein Properties

Ave. residue weight 111.42 Da
Charge 6.50
Isoelectric point 8.44
Molecular weight 39.00 kDa
Number of residues 350
Sequence
Gene Expression

Qualitative Gene Expression

DescriptionLevelEvidenceReference
RNA levelpresent during GO:0072690Northern assay evidencePMID:10430583
increased during GO:0051321Northern assay evidencePMID:10430583

Quantitative Gene Expression

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
1.1during GO:0072690PECO:0000005,
PECO:0000014
population wideexperimental evidencePMID:23101633
0.3during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population wideexperimental evidencePMID:23101633
Subunit Composition
DescriptionQualifierReferenceCount
heteromeric(2) PMID:1156088941
Species Distribution
DescriptionQualifierReferenceCount
conserved in fungi4603
conserved in eukaryotes4514
conserved in bacteria1001
conserved in metazoa3424
conserved in vertebrates3399
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Physical Interactions

Source: BioGRID

View all interactions in esyN
View the HCPIN interactions in esyN

Gene Product Evidence Reference
binds DNA-binding domain construct withrad51RecA family recombinase Rad51/Rhp51 Two-hybridPMID:11560889
binds activation domain construct withrad51RecA family recombinase Rad51/Rhp51 Two-hybridPMID:11560889
binds activation domain construct withrad52DNA recombination protein, Rad51 mediator Rad52 (previously Rad22) Two-hybridPMID:11560889
binds DNA-binding domain construct withrad52DNA recombination protein, Rad51 mediator Rad52 (previously Rad22) Two-hybridPMID:11560889
binds DNA-binding domain construct withrad52DNA recombination protein, Rad51 mediator Rad52 (previously Rad22) Two-hybridPMID:23695164
binds activation domain construct withrad57RecA family ATPase Rad57/Rhp57 Two-hybridPMID:11560889
affinity capturesrad57RecA family ATPase Rad57/Rhp57 Affinity Capture-WesternPMID:11560889
affinity captured byrad57RecA family ATPase Rad57/Rhp57 Affinity Capture-WesternPMID:11560889
binds DNA-binding domain construct withrad57RecA family ATPase Rad57/Rhp57 Two-hybridPMID:11560889
Genetic Interactions

Source: BioGRID

View these interactions in esyN

Gene Product Evidence Reference
negative genetic interaction withadn2transcription factor (predicted) Negative GeneticPMID:22681890
negative genetic interaction withado1adenosine kinase (predicted) Negative GeneticPMID:22681890
positive genetic interaction withair1zinc knuckle TRAMP complex subunit Air1 Positive GeneticPMID:22681890
positive genetic interaction withamk2AMP-activated protein kinase beta subunit Amk2 Positive GeneticPMID:22681890
positive genetic interaction withams2cell cycle regulated GATA-type transcription factor Ams2 Positive GeneticPMID:22681890
negative genetic interaction withapt1adenine phosphoribosyltransferase (APRT) (predicted) Negative GeneticPMID:22681890
negative genetic interaction witharp42SWI/SNF and RSC complex subunit Arp42 Negative GeneticPMID:22681890
negative genetic interaction withatb2tubulin alpha 2 Negative GeneticPMID:22681890
negative genetic interaction withatd1aldehyde dehydrogenase (predicted) Negative GeneticPMID:22681890
positive genetic interaction withatg1autophagy and CVT pathway serine/threonine protein kinase Atg1 Positive GeneticPMID:22681890
negative genetic interaction withatg5autophagy associated protein Atg5 Negative GeneticPMID:22681890
negative genetic interaction withath1ataxin-2 homolog Negative GeneticPMID:22681890
negative genetic interaction withatl1alkyltransferase-like protein Atl1 Negative GeneticPMID:22681890
negative genetic interaction withbun62WD repeat protein, human WDR20 family, Bun62 Negative GeneticPMID:22681890
negative genetic interaction withccq1telomere maintenance protein Ccq1 Negative GeneticPMID:22681890
negative genetic interaction withcda1chitin deacetylase Cda1 Negative GeneticPMID:22681890
positive genetic interaction withcgi121EKC/KEOPS complex subunit Cgi121 (predicted) Positive GeneticPMID:22681890
negative genetic interaction withcho2phosphatidylethanolamine N-methyltransferase Cho2 Negative GeneticPMID:22681890
negative genetic interaction withclr2chromatin silencing protein Clr2 Negative GeneticPMID:22681890
negative genetic interaction withclr3histone deacetylase (class II) Clr3 Negative GeneticPMID:22681890
negative genetic interaction withclr4histone H3 lysine methyltransferase Clr4 Negative GeneticPMID:22681890
negative genetic interaction withcph1Clr6 histone deacetylase associated PHD protein-1 Cph1 Negative GeneticPMID:22681890
negative genetic interaction withcrb2DNA repair protein Rad9 homolog Crb2 Negative GeneticPMID:22681890
positive genetic interaction withcsn71COP9/signalosome complex subunit 7a (predicted) Positive GeneticPMID:22681890
negative genetic interaction withdad2DASH complex subunit Dad2 Negative GeneticPMID:22681890
synthetic growth defect withdad3DASH complex subunit Dad3 Synthetic Growth DefectPMID:23365689
phenotype enhanced bydad3DASH complex subunit Dad3 Phenotypic EnhancementPMID:23365689
phenotype enhanced bydad5DASH complex subunit Dad5 Phenotypic EnhancementPMID:23365689
synthetic growth defect withdad5DASH complex subunit Dad5 Synthetic Growth DefectPMID:23365689
negative genetic interaction withdbl1double strand break localizing Dbl1 Negative GeneticPMID:22681890
positive genetic interaction withdbl2meiotic chromosome segregation protein Dbl2 Positive GeneticPMID:22681890
positive genetic interaction withdbl7Schizosaccharomyces specific protein, double strand break localizing Dbl7 Positive GeneticPMID:22681890
negative genetic interaction withdef1RNAPII degradation factor Def1 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withdep1Sds3-like family protein Dep1 Negative GeneticPMID:22681890
negative genetic interaction withdis323'-5'-exoribonuclease activity Dis3L2 Negative GeneticPMID:22681890
enhances phenotype ofdmc1RecA family ATPase Dmc1 Phenotypic EnhancementPMID:14668362
negative genetic interaction withdph1UBA domain protein Dph1 Negative GeneticPMID:22681890
negative genetic interaction withegd2nascent polypeptide-associated complex alpha subunit Egd2 Negative GeneticPMID:22681890
positive genetic interaction withemp70EMP70 family endosomal transport protein Emp70 Positive GeneticPMID:22681890
synthetic lethal withfan1Fanconi-associated nuclease Fan1 Synthetic LethalityPMID:24192486
synthetically rescuesfbh1DNA helicase I, ubiquitin ligase F-box adaptor Fbh1 Synthetic RescuePMID:16135800
negative genetic interaction withfin1serine/threonine protein kinase, NIMA related Fin1 Negative GeneticPMID:22681890
negative genetic interaction withfkbp39FKBP-type peptidyl-prolyl cis-trans isomerase (predicted) Negative GeneticPMID:22681890
negative genetic interaction withfma1methionine aminopeptidase Fma1 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withfsv1SNARE Fsv1 Negative GeneticPMID:22681890
negative genetic interaction withgcd10tRNA (m1A) methyltransferase Gcd10 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withgir2RWD domain protein, involved in cytoplasmic translation Gir2 Negative GeneticPMID:22681890
negative genetic interaction withgma12alpha-1,2-galactosyltransferase Gma12 Negative GeneticPMID:22681890
negative genetic interaction withgmh5alpha-1,2-galactosyltransferase (predicted) Negative GeneticPMID:22681890
negative genetic interaction withgpd1glycerol-3-phosphate dehydrogenase Gpd1 Negative GeneticPMID:22681890
negative genetic interaction withgpd3glyceraldehyde 3-phosphate dehydrogenase Gpd3 Negative GeneticPMID:22681890
synthetic growth defect withgtb1gamma-tubulin Gtb1 Synthetic Growth DefectPMID:22737087
negative genetic interaction withhrd3HRD ubiquitin ligase complex subunit (predicted) Negative GeneticPMID:22681890
negative genetic interaction withhrp3ATP-dependent DNA helicase Hrp3 Negative GeneticPMID:22681890
negative genetic interaction withhrq1RecQ type DNA helicase Hrq1 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withhus1checkpoint clamp complex protein Hus1 Negative GeneticPMID:22681890
negative genetic interaction withklp5kinesin-like protein Klp5 Negative GeneticPMID:22681890
synthetically rescued bykms1meiotic spindle pole body protein Kms1 Synthetic RescuePMID:24943839
negative genetic interaction withlub1WD repeat protein Lub1 Negative GeneticPMID:22681890
synthetic growth defect withmad2mitotic spindle checkpoint protein Mad2 Synthetic Growth DefectPMID:22737087
synthetically rescued bymag1DNA-3-methyladenine glycosylase Mag1 Synthetic RescuePMID:15722486
negative genetic interaction withmcl1DNA polymerase alpha accessory factor Mcl1 Negative GeneticPMID:22681890
positive genetic interaction withmms19Dos2 silencing complex subunit Mms19 Positive GeneticPMID:22681890
negative genetic interaction withmrt4mRNA turnover and ribosome assembly protein Mrt4 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withmto1MT organizer Mto1 Negative GeneticPMID:22681890
negative genetic interaction withmug154conserved fungal protein Negative GeneticPMID:22681890
negative genetic interaction withmug2mug2/mug135/meu2 family Negative GeneticPMID:22681890
negative genetic interaction withmug51variant protein kinase 19 family protein Negative GeneticPMID:22681890
negative genetic interaction withmyo51myosin type V Negative GeneticPMID:22681890
negative genetic interaction withnem1Nem1-Spo7 phosphatase complex catalytic subunit Nem1 (predicted) Negative GeneticPMID:22681890
synthetic growth defect withnse6Smc5-6 complex non-SMC subunit Nse6 Synthetic Growth DefectPMID:16478984
synthetically rescuesnse6Smc5-6 complex non-SMC subunit Nse6 Synthetic RescuePMID:16478984
synthetic growth defect withnth1DNA endonuclease III Synthetic Growth DefectPMID:12675805
negative genetic interaction withnth1DNA endonuclease III Negative GeneticPMID:22681890
negative genetic interaction withnup132nucleoporin Nup132 Negative GeneticPMID:22681890
negative genetic interaction withnup60nucleoporin Nup60 Negative GeneticPMID:22681890
negative genetic interaction withotu2ubiquitin specific cysteine protease, OTU family, Otu2 Negative GeneticPMID:22681890
negative genetic interaction withpac2cAMP-independent regulatory protein Pac2 Negative GeneticPMID:22681890
negative genetic interaction withpar1protein phosphatase regulatory subunit Par1 Negative GeneticPMID:22681890
negative genetic interaction withpcf2CAF assembly factor (CAF-1) complex subunit B, Pcf2 Negative GeneticPMID:22681890
negative genetic interaction withpdh1Golgi to ER protein (predicted) Negative GeneticPMID:22681890
positive genetic interaction withpku80Ku domain protein Pku80 Positive GeneticPMID:22681890
negative genetic interaction withpli1SUMO E3 ligase Pli1 Negative GeneticPMID:22681890
enhances phenotype ofpmd1leptomycin transmembrane transporter Pmd1 Phenotypic EnhancementPMID:23365689
negative genetic interaction withpmt3SUMO Negative GeneticPMID:22681890
negative genetic interaction withpom152nucleoporin Pom152 Negative GeneticPMID:22681890
phenotype enhanced byppt1para-hydroxybenzoate--polyprenyltransferase Ppt1 Phenotypic EnhancementPMID:23365689
negative genetic interaction withprz1calcineurin responsive transcription factor Prz1 Negative GeneticPMID:22681890
negative genetic interaction withqcr6ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein (predicted) Negative GeneticPMID:22681890
negative genetic interaction withrad1checkpoint clamp complex protein Rad1 Negative GeneticPMID:22681890
negative genetic interaction withrad13DNA repair nuclease Rad13 Negative GeneticPMID:22681890
negative genetic interaction withrad17RFC related checkpoint protein Rad17 Negative GeneticPMID:22681890
negative genetic interaction withrad2FEN-1 endonuclease Rad2 Negative GeneticPMID:22681890
synthetic growth defect withrad3ATR checkpoint kinase Rad3 Synthetic Growth DefectPMID:17178839
negative genetic interaction withrad3ATR checkpoint kinase Rad3 Negative GeneticPMID:22681890
enhances phenotype ofrad50DNA repair protein Rad50 Phenotypic EnhancementPMID:11726502
synthetic growth defect withrad52DNA recombination protein, Rad51 mediator Rad52 (previously Rad22) Synthetic Growth DefectPMID:10430583
enhances phenotype ofrad8ubiquitin-protein ligase E3 Rad8 Phenotypic EnhancementPMID:19547744
negative genetic interaction withrad8ubiquitin-protein ligase E3 Rad8 Negative GeneticPMID:22681890
synthetic growth defect withrad8ubiquitin-protein ligase E3 Rad8 Synthetic Growth DefectPMID:24875629
negative genetic interaction withraf1CLRC ubiquitin E3 ligase complex specificiy factor Raf1/Dos1 Negative GeneticPMID:22681890
negative genetic interaction withraf2Rik1-associated factor Raf2 Negative GeneticPMID:22681890
negative genetic interaction withrap1telomere binding protein Rap1 Negative GeneticPMID:22681890
enhances phenotype ofrav1RAVE complex subunit Rav1 Phenotypic EnhancementPMID:23365689
synthetic growth defect withrav1RAVE complex subunit Rav1 Synthetic Growth DefectPMID:23365689
negative genetic interaction withrcd1RNA-binding protein, CCR4-NOT complex subunit Rcd1 Negative GeneticPMID:22681890
negative genetic interaction withrdp1RNA-directed RNA polymerase Rdp1 Negative GeneticPMID:22681890
negative genetic interaction withrec11meiotic cohesin complex subunit Rec11 Negative GeneticPMID:22681890
negative genetic interaction withrev3DNA polymerase zeta catalytic subunit Rev3 (predicted) Negative GeneticPMID:22681890
synthetic growth defect withrhp16Rad16 homolog ATP-dependent DNA helicase/ ubiquitin protein ligase E3 Rhp16 Synthetic Growth DefectPMID:12675805
negative genetic interaction withrhp18Rad18 homolog ubiquitin protein ligase E3, Rhp18 Negative GeneticPMID:22681890
negative genetic interaction withrhp23Rad23 homolog Rhp23 Negative GeneticPMID:22681890
negative genetic interaction withrik1silencing protein Rik1 Negative GeneticPMID:22681890
negative genetic interaction withrpa12DNA-directed RNA polymerase complex I subunit Rpa12 Negative GeneticPMID:22681890
positive genetic interaction withrpb9DNA-directed RNA polymerase II complex subunit Rpb9 Positive GeneticPMID:22681890
negative genetic interaction withrpl100260S ribosomal protein L10 Negative GeneticPMID:22681890
negative genetic interaction withrpl10260S ribosomal protein L10a Negative GeneticPMID:22681890
negative genetic interaction withrpl210260S ribosomal protein L21 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withrpl270160S ribosomal protein L27 Negative GeneticPMID:22681890
negative genetic interaction withrpl35b60S ribosomal protein L35a (predicted) Negative GeneticPMID:22681890
negative genetic interaction withrpp20160S acidic ribosomal protein A2 Negative GeneticPMID:22681890
negative genetic interaction withrps120140S ribosomal protein S12 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withrps40140S ribosomal protein S4 (predicted) Negative GeneticPMID:22681890
synthetically rescuesrqh1RecQ type DNA helicase Rqh1 Synthetic RescuePMID:16135800
synthetically rescuesrqh1RecQ type DNA helicase Rqh1 Synthetic RescuePMID:15802523
synthetically rescuesrqh1RecQ type DNA helicase Rqh1 Synthetic RescuePMID:14993467
negative genetic interaction withrrp2ATP-dependent DNA helicase, ubiquitin-protein ligase E3 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withrsc4RSC complex subunit Rsc4 Negative GeneticPMID:22681890
negative genetic interaction withset9histone lysine H3-K20 methyltransferase Set9 Negative GeneticPMID:22681890
enhances phenotype ofsfr1Swi five-dependent recombination mediator Sfr1 Phenotypic EnhancementPMID:18769921
rescued bysfr1Swi five-dependent recombination mediator Sfr1 Phenotypic SuppressionPMID:16080597
synthetic lethal withslx8SUMO-targeted ubiquitin-protein ligase E3 Slx8 Synthetic LethalityPMID:17762865
positive genetic interaction withsnz1pyridoxine biosynthesis protein Positive GeneticPMID:22681890
negative genetic interaction withSPAC24B11.05pyrimidine 5'-nucleotidase (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPAC30.02celongator complex associated protein Kti2 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPAC3H5.08cWD repeat protein, human WDR44 family Negative GeneticPMID:22681890
negative genetic interaction withSPAC5H10.04NADPH dehydrogenase (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPAC6G10.06FAD-dependent amino acid oxidase involved in late endosome to Golgi transport (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPAC6G9.14RNA-binding protein (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPAC750.01aldo/keto reductase family protein Negative GeneticPMID:22681890
negative genetic interaction withSPAC869.03curea transmembrane transporter (predicted) Negative GeneticPMID:22681890
positive genetic interaction withSPBC1198.06cmannan endo-1,6-alpha-mannosidase (predicted) Positive GeneticPMID:22681890
negative genetic interaction withSPBC1289.14adducin (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPBC13E7.07Schizosaccharomyces specific protein Negative GeneticPMID:22681890
negative genetic interaction withSPBC1778.09GTPase activating protein (predicted) Negative GeneticPMID:22681890
positive genetic interaction withSPBC17A3.06phosphoprotein phosphatase (predicted) Positive GeneticPMID:22681890
negative genetic interaction withSPBC21B10.08cantibiotic biosynthesis monooxygenase-like domain (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPBC25H2.15SSU-rRNA maturation protein Tsr4 homolog 1 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPBC2G5.01ER protein involved in ER-nucleus signaling (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPBC31F10.02acyl-CoA hydrolase (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPBC3B8.04csodium ion transmembrane transporter (predicted) Negative GeneticPMID:22681890
positive genetic interaction withSPBC543.05cborate transmembrane transporter (predicted) Positive GeneticPMID:22681890
negative genetic interaction withSPBC56F2.03actin-like protein Arp10 (predicted) Negative GeneticPMID:22681890
positive genetic interaction withSPBC83.17transcriptional coactivator, multiprotein bridging factor Mbf1 (predicted) Positive GeneticPMID:22681890
positive genetic interaction withSPBC9B6.11cCCR4/nocturin family endoribonuclease (predicted) Positive GeneticPMID:22681890
negative genetic interaction withSPBPB10D8.06ctransmembrane transporter (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPCC24B10.18human Leydig cell tumor 10 kDa protein homolog Negative GeneticPMID:22681890
negative genetic interaction withSPCC550.07acetamidase (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPCC594.04csteroid oxidoreductase superfamily protein (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPCC777.02transcription factor (predicted) Negative GeneticPMID:22681890
synthetically rescuessrs2ATP-dependent DNA helicase, UvrD subfamily Synthetic RescuePMID:16135800
synthetic growth defect withsrs2ATP-dependent DNA helicase, UvrD subfamily Synthetic Growth DefectPMID:14993467
synthetically rescuessrs2ATP-dependent DNA helicase, UvrD subfamily Synthetic RescuePMID:14993467
synthetic growth defect withssb3DNA replication factor A subunit Ssb3 Synthetic Growth DefectPMID:20885790
positive genetic interaction withssp2AMP-activated protein serine/threonine kinase alpha subunit Ssp2 Positive GeneticPMID:22681890
negative genetic interaction withsum2G2/M transition checkpoint protein Sum2 Negative GeneticPMID:22681890
negative genetic interaction withswd3WD repeat protein Swd3 Negative GeneticPMID:22681890
synthetic growth defect withswi5Swi5 protein Synthetic Growth DefectPMID:15466419
negative genetic interaction withswi6HP1 family chromodomain protein Swi6 Negative GeneticPMID:22681890
negative genetic interaction withtaz1human TRF ortholog Taz1 Negative GeneticPMID:22681890
positive genetic interaction withtma20RNA-binding protein Tma20 (predicted) Positive GeneticPMID:22681890
synthetically rescuestop3DNA topoisomerase III Synthetic RescuePMID:12724426
negative genetic interaction withtrs130TRAPP complex subunit Trs130 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withubc13ubiquitin conjugating enzyme E2 Ubc13 Negative GeneticPMID:22681890
negative genetic interaction withubc14ubiquitin conjugating enzyme E2 Ubc14 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withubp2ubiquitin C-terminal hydrolase Ubp2 Negative GeneticPMID:22681890
negative genetic interaction withubp4ubiquitin C-terminal hydrolase Ubp4 Negative GeneticPMID:22681890
negative genetic interaction withubp6ubiquitin C-terminal hydrolase Ubp6 Negative GeneticPMID:22681890
negative genetic interaction withupf1ATP-dependent RNA helicase Upf1 Negative GeneticPMID:22681890
negative genetic interaction withura1carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1 Negative GeneticPMID:22681890
negative genetic interaction withvac7Vac7 ortholog (predicted) Negative GeneticPMID:22681890
positive genetic interaction withzip1transcription factor Zip1 Positive GeneticPMID:22681890
External References
Database Identifier Description
NBRP SPAC3C7.03c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC3C7.03c Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPAC3C7.03c BioGRID Interaction Datasets
Expression Viewer SPAC3C7.03c Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPAC3C7.03c Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPAC3C7.03c Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPAC3C7.03c Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPAC3C7.03c Polyadenylation Viewer (Gullerova lab)
pombeTV SPAC3C7.03c Transcriptome Viewer (Bähler Lab)
GEO SPAC3C7.03c GEO profiles
PInt SPAC3C7.03c Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPAC3C7.03c Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPAC3C7.03c Fission yeast phenotypic data & analysis
Cyclebase SPAC3C7.03c.1 Cell Cycle Data
SPD / RIKEN40/40C10Orfeome Localization Data
UniProtKB/SwissProtO14129DNA repair protein rhp55
ModBaseO14129Database of comparative protein structure models
STRINGO14129Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_593604RecA family ATPase Rhp55
RefSeq mRNANM_001019035972h- RecA family ATPase Rhp55 (rhp55), mRNA
European Nucleotide ArchiveAF053410ENA EMBL mapping
European Nucleotide ArchiveCAB16734.1ENA Protein Mapping
UniParcUPI0000133039UniProt Archive

Literature for rad55

Search: Europe PMC or PubMed

Release Version: PomBase:26_52 - 11 May 2015