rad55 (SPAC3C7.03c)


Gene Standard Namerad55 Characterisation Statuspublished
Systematic IDSPAC3C7.03c Feature Typeprotein coding
Synonymsrhp55 Name Description
ProductRecA family ATPase Rad55/Rhp55 Product Size350aa, 39.00 kDa
Genomic Location Chromosome I, 2067904-2066442 (1463nt); CDS:2067764-2066668 (1097nt)

Ensembl Gene Location
GO Molecular Function
Term NameCount
ATP binding558
Annotation ExtensionEvidenceWith/FromReference
protein-DNA loading ATPase activity15
Annotation ExtensionEvidenceWith/FromReference
single-stranded DNA binding29
Annotation ExtensionEvidenceWith/FromReference
GO Biological Process
Term NameCount
cellular response to DNA damage stimulus211
Annotation ExtensionEvidenceWith/FromReference
DNA recombinase assembly6
Annotation ExtensionEvidenceWith/FromReference
double-strand break repair via homologous recombination32
Annotation ExtensionEvidenceWith/FromReference
meiotic gene conversion8
Annotation ExtensionEvidenceWith/FromReference
meiotic joint molecule formation5
Annotation ExtensionEvidenceWith/FromReference
reciprocal meiotic recombination43
Annotation ExtensionEvidenceWith/FromReference
SOS response1
Annotation ExtensionEvidenceWith/FromReference
strand invasion7
Annotation ExtensionEvidenceWith/FromReference
GO Cellular Component
Term NameCount
cytosol2315
Annotation ExtensionEvidenceWith/FromReference
nucleus2740
Annotation ExtensionEvidenceWith/FromReference
Rhp55-Rhp57 complex2
Annotation ExtensionEvidenceWith/FromReference
site of double-strand break46
Annotation ExtensionEvidenceWith/FromReference
Fission Yeast Phenotype Ontology
Gene Deletion Viability: Viable

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002175decreased cell population growth at low temperature8
expressivity FYPO_EXT:0000003Cell growth assayrad55ΔNullPMID:10430583
FYPO:0001974increased number of cells with 1C DNA contentFlow cytometry datarad55ΔNullPECO:0000170, PECO:0000137, PECO:0000005PMID:2317367238
FYPO:0001357normal vegetative cell population growthCell growth assayrad55ΔNullPECO:0000005PMID:10430583641
FYPO:0001098sensitive to 4-nitroquinoline N-oxide159
expressivity FYPO_EXT:0000003Cell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:19264558
FYPO:0000095sensitive to bleomycinCell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:2317367248
FYPO:0001701sensitive to bortezomib256
expressivity FYPO_EXT:0000003Cell growth assayrad55ΔNullPECO:0000005, PECO:0000137PMID:21760946
FYPO:0000085sensitive to camptothecin211
expressivity FYPO_EXT:0000001Cell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:19264558
FYPO:0003559sensitive to doxorubicin91
expressivity FYPO_EXT:0000002Cell growth assayrad55ΔNullPECO:0000137PMID:23365689
FYPO:0000088sensitive to hydroxyurea514
expressivity FYPO_EXT:0000002Cell Growth Assayrad55ΔNullPECO:0000137, PECO:0000102PMID:23697806
Cell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:23173672
FYPO:0000267sensitive to ionizing radiation46
expressivity FYPO_EXT:0000003Cell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:19264558
expressivity FYPO_EXT:0000002Cell growth assayrad55ΔNullPECO:0000005PMID:10430583
expressivity FYPO_EXT:0000001Cell growth assayrad55ΔNullPECO:0000006PMID:10430583
FYPO:0000089sensitive to methyl methanesulfonate219
expressivity FYPO_EXT:0000001Cell growth assayrad55ΔNullPECO:0000006PMID:10430583
expressivity FYPO_EXT:0000002Cell growth assayrad55ΔNullPECO:0000005PMID:10430583
expressivity FYPO_EXT:0000002Cell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:19264558
Cell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:23173672
FYPO:0000091sensitive to thiabendazoleCell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:23173672176
FYPO:0000268sensitive to UV during vegetative growth123
expressivity FYPO_EXT:0000003Cell growth assayrad55ΔNullPECO:0000005PMID:10430583
expressivity FYPO_EXT:0000001Cell growth assayrad55ΔNullPECO:0000006PMID:10430583
Cell growth assayrad55ΔNullPECO:0000102PMID:12724426
Cell growth assayrad55ΔNullPECO:0000137, PECO:0000005PMID:23173672
FYPO:0002060viable vegetative cell populationMicroscopyrad55ΔNullPMID:204732893759
Microscopyrad55ΔNullPECO:0000005, PECO:0000137PMID:23697806
Cell growth assayrad55ΔNullPMID:12724426

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0003625abnormal microtubule cytoskeleton morphology during mitotic interphase186
penetrance FYPO_EXT:0000001experimental phenotypic evidencerad55ΔNullPECO:0000005, PECO:0000103, PECO:0000137DOI:10.1016/j.devcel.2014.09.005
FYPO:0000059abnormal mitotic cell cycleMicroscopyrad55ΔNullPECO:0000005, PECO:0000137PMID:23697806686
FYPO:0001430abnormal mitotic cell cycle arrest with unreplicated DNAFlow cytometry datarad55ΔNullPECO:0000170, PECO:0000137, PECO:0000005PMID:2317367241
FYPO:0000062abnormal nuclear morphology during vegetative growth50
penetrance FYPO_EXT:0000003Microscopyrad55ΔNullPECO:0000005PMID:10430583
FYPO:0003180decreased intergenic meiotic recombinationCell growth assayrad55ΔNullPECO:0000005PMID:1043058317
FYPO:0000584decreased sporulation61
expressivity FYPO_EXT:0000002Cell growth assayrad55ΔNullPECO:0000005PMID:10430583
FYPO:0000158DNA content increased during vegetative growth18
penetrance FYPO_EXT:0000003Flow cytometry datarad55ΔNullPECO:0000005PMID:10430583
FYPO:0001122elongated vegetative cell685
penetrance FYPO_EXT:0000003Microscopyrad55ΔNullPECO:0000005PMID:10430583
FYPO:0002151inviable spore465
penetrance FYPO_EXT:0000002Cell growth assayrad55ΔNullPECO:0000005PMID:10430583
FYPO:0001492viable elongated vegetative cell221
penetrance FYPO_EXT:0000001Microscopyrad55ΔNullPECO:0000005, PECO:0000137PMID:23697806
expressivity FYPO_EXT:0000001
penetrance FYPO_EXT:0000003
experimental phenotypic evidencerad55ΔNullPECO:0000137, PECO:0000005, PECO:0000103DOI:10.1016/j.devcel.2014.09.005
FYPO:0001491viable vegetative cellCell growth assayrad55ΔNullPMID:127244263607
FYPO:0002197viable vegetative cell with abnormal cell shape467
penetrance FYPO_EXT:0000001experimental phenotypic evidencerad55ΔNullPECO:0000005, PECO:0000103, PECO:0000137DOI:10.1016/j.devcel.2014.09.005
Target Of
OntologyRelationshipGeneProductReference
FYPO affected by mutation in dbl1 Schizosaccharomyces specific protein, double strand break localizing Dbl1 PMID:23628481
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
120679042067749
220677042066442
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00154 Pfam IPR013765 DNA recombination and repair protein RecA 29 80 1
PS50162 Prosite Profiles IPR020588 DNA recombination/repair protein RecA-like, ATP-binding domain 21 249 4
PTHR13682 HMMPANTHER 32 349 1
3.40.50.300 Gene3D 214 331 288
3.40.50.300 Gene3D 29 160 288
SSF52540 SuperFamily IPR027417 P-loop containing nucleoside triphosphate hydrolase 25 170 294

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceCount
PBO:0000539AAA family ATPaseTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000539
PBO:0001319RecA familyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0001319
PBO:0001320helix-hairpin-helixTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0001320

Protein Properties

Ave. residue weight 111.42 Da
Charge 6.50
Isoelectric point 8.44
Molecular weight 39.00 kDa
Number of residues 350
Sequence
Gene Expression

Qualitative Gene Expression

DescriptionLevelEvidenceReference
RNA levelincreased during GO:0051321Northern assay evidencePMID:10430583
present during GO:0072690Northern assay evidencePMID:10430583

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
NDduring cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
1.1during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
0.3during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
Subunit Composition
DescriptionQualifierReferenceCount
heteromeric(2) PMID:1156088942
Species Distribution
DescriptionQualifierReferenceCount
conserved in fungi4600
conserved in eukaryotes4514
conserved in bacteria1000
conserved in metazoa3425
conserved in vertebrates3400
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Physical Interactions

Source: BioGRID

View all interactions in esyN
View the HCPIN interactions in esyN

Gene Product Evidence Reference
rad51RecA family recombinase Rad51/Rhp51 Two-hybridPMID:11560889
rad57RecA family ATPase Rad57/Rhp57 Affinity Capture-WesternPMID:11560889
Two-hybrid
rad52DNA recombination protein Rad52 (previously Rad22) Two-hybridPMID:11560889
Two-hybridPMID:23695164
Genetic Interactions

Source: BioGRID

View these interactions in esyN

Gene Product Evidence Reference
taz1human TRF ortholog Taz1 Negative GeneticPMID:22681890
rpp20160S acidic ribosomal protein A2 Negative GeneticPMID:22681890
SPBC1105.08EMP70 family Positive GeneticPMID:22681890
rik1silencing protein Rik1 Negative GeneticPMID:22681890
pcf2CAF assembly factor (CAF-1) complex subunit B, Pcf2 Negative GeneticPMID:22681890
SPBC543.05cHC03 family inorganic anion exchanger (predicted) Positive GeneticPMID:22681890
SPCC24B10.18human Leydig cell tumor 10 kDa protein homolog Negative GeneticPMID:22681890
atl1alkyltransferase-like protein Atl1 Negative GeneticPMID:22681890
ubc14ubiquitin conjugating enzyme Ubc14 (predicted) Negative GeneticPMID:22681890
SPAC24B11.05pyrimidine 5'-nucleotidase (predicted) Negative GeneticPMID:22681890
mms19Dos2 silencing complex subunit Mms19 Positive GeneticPMID:22681890
SPBC3B8.04cmembrane transporter (predicted) Negative GeneticPMID:22681890
mag1DNA-3-methyladenine glycosylase Mag1 Synthetic RescuePMID:15722486
ubp4ubiquitin C-terminal hydrolase Ubp4 Negative GeneticPMID:22681890
SPBC1778.09GTPase activating protein (predicted) Negative GeneticPMID:22681890
rad1checkpoint clamp complex protein Rad1 Negative GeneticPMID:22681890
dad2DASH complex subunit Dad2 Negative GeneticPMID:22681890
rap1telomere binding protein Rap1 Negative GeneticPMID:22681890
vac7Vac7 ortholog (predicted) Negative GeneticPMID:22681890
mcl1DNA polymerase alpha accessory factor Mcl1 Negative GeneticPMID:22681890
rad17RFC related checkpoint protein Rad17 Negative GeneticPMID:22681890
rqh1RecQ type DNA helicase Rqh1 Synthetic RescuePMID:16135800
Synthetic RescuePMID:15802523
Synthetic RescuePMID:14993467
SPAC3H5.08cWD repeat protein, human WDR44 family Negative GeneticPMID:22681890
dad3DASH complex subunit Dad3 Synthetic Growth DefectPMID:23365689
Phenotypic Enhancement
dbl1Schizosaccharomyces specific protein, double strand break localizing Dbl1 Negative GeneticPMID:22681890
rpb9DNA-directed RNA polymerase II complex subunit Rpb9 Positive GeneticPMID:22681890
gpd1glycerol-3-phosphate dehydrogenase Gpd1 Negative GeneticPMID:22681890
zip1transcription factor Zip1 Positive GeneticPMID:22681890
pac2cAMP-independent regulatory protein Pac2 Negative GeneticPMID:22681890
nse6Smc5-6 complex non-SMC subunit Nse6 Synthetic Growth DefectPMID:16478984
Synthetic Rescue
SPAC30.02celongator complex associated protein Kti2 (predicted) Negative GeneticPMID:22681890
dep1Sds3-like family protein Dep1 Negative GeneticPMID:22681890
ssp2serine/threonine protein kinase Ssp2 Positive GeneticPMID:22681890
fkbp39FKBP-type peptidyl-prolyl cis-trans isomerase (predicted) Negative GeneticPMID:22681890
swi6HP1 family chromodomain protein Swi6 Negative GeneticPMID:22681890
ado1adenosine kinase (predicted) Negative GeneticPMID:22681890
mug51variant protein kinase 19 family protein Negative GeneticPMID:22681890
prz1calcineurin responsive transcription factor Prz1 Negative GeneticPMID:22681890
hus1checkpoint clamp complex protein Hus1 Negative GeneticPMID:22681890
rpl100260S ribosomal protein L10 Negative GeneticPMID:22681890
clr3histone deacetylase (class II) Clr3 Negative GeneticPMID:22681890
gcd10tRNA (m1A) methyltransferase Gcd10 (predicted) Negative GeneticPMID:22681890
sum2G2/M transition checkpoint protein Sum2 Negative GeneticPMID:22681890
ams2cell cycle regulated GATA-type transcription factor Ams2 Positive GeneticPMID:22681890
nth1DNA endonuclease III Synthetic Growth DefectPMID:12675805
Negative GeneticPMID:22681890
lub1WD repeat protein Lub1 Negative GeneticPMID:22681890
kms1meiotic spindle pole body protein Kms1 Phenotypic SuppressionPMID:24943839
Synthetic Rescue
pom152nucleoporin Pom152 Negative GeneticPMID:22681890
mug2mug2/mug135/meu2 family Negative GeneticPMID:22681890
mad2mitotic spindle checkpoint protein Mad2 Synthetic Growth DefectPMID:22737087
rav1RAVE complex subunit Rav1 Phenotypic EnhancementPMID:23365689
Synthetic Growth Defect
SPAC6G10.06FAD-dependent amino acid oxidase involved in late endosome to Golgi transport (predicted) Negative GeneticPMID:22681890
atd1aldehyde dehydrogenase (predicted) Negative GeneticPMID:22681890
ath1ataxin-2 homolog Negative GeneticPMID:22681890
SPBC1289.14adducin (predicted) Negative GeneticPMID:22681890
fsv1SNARE Fsv1 Negative GeneticPMID:22681890
gtb1gamma-tubulin Gtb1 Synthetic Growth DefectPMID:22737087
bun62WD repeat protein, human WDR20 family, Bun62 Negative GeneticPMID:22681890
raf2Rik1-associated factor Raf2 Negative GeneticPMID:22681890
rhp23Rad23 homolog Rhp23 Negative GeneticPMID:22681890
gmh5alpha-1,2-galactosyltransferase (predicted) Negative GeneticPMID:22681890
myo51myosin type V Negative GeneticPMID:22681890
dph1UBA domain protein Dph1 Negative GeneticPMID:22681890
tma20RNA-binding protein Tma20 (predicted) Positive GeneticPMID:22681890
dbl7Schizosaccharomyces specific protein, double strand break localizing Dbl7 Positive GeneticPMID:22681890
SPAC869.03curea transporter (predicted) Negative GeneticPMID:22681890
rad50DNA repair protein Rad50 Phenotypic EnhancementPMID:11726502
pli1SUMO E3 ligase Pli1 Negative GeneticPMID:22681890
cph1Clr6 histone deacetylase associated PHD protein-1 Cph1 Negative GeneticPMID:22681890
swi5Swi5 protein Synthetic Growth DefectPMID:15466419
SPBC83.17transcriptional coactivator, multiprotein bridging factor Mbf1 (predicted) Positive GeneticPMID:22681890
dis323'-5'-exoribonuclease activity Dis3L2 Negative GeneticPMID:22681890
rad52DNA recombination protein Rad52 (previously Rad22) Synthetic Growth DefectPMID:10430583
dad5DASH complex subunit Dad5 Phenotypic EnhancementPMID:23365689
Synthetic Growth Defect
SPCC777.02transcription factor (predicted) Negative GeneticPMID:22681890
SPBC13E7.07Schizosaccharomyces specific protein Negative GeneticPMID:22681890
ccq1telomere maintenance protein Ccq1 Negative GeneticPMID:22681890
par1protein phosphatase regulatory subunit Par1 Negative GeneticPMID:22681890
hrp3ATP-dependent DNA helicase Hrp3 Negative GeneticPMID:22681890
SPBC56F2.03actin-like protein Arp10 (predicted) Negative GeneticPMID:22681890
gma12alpha-1,2-galactosyltransferase Gma12 Negative GeneticPMID:22681890
fma1methionine aminopeptidase Fma1 (predicted) Negative GeneticPMID:22681890
mrt4mRNA turnover and ribosome assembly protein Mrt4 (predicted) Negative GeneticPMID:22681890
air1zinc knuckle TRAMP complex subunit Air1 Positive GeneticPMID:22681890
rps120140S ribosomal protein S12 (predicted) Negative GeneticPMID:22681890
csn71COP9/signalosome complex subunit 7a (predicted) Positive GeneticPMID:22681890
SPBC31F10.02acyl-CoA hydrolase (predicted) Negative GeneticPMID:22681890
rdp1RNA-directed RNA polymerase Rdp1 Negative GeneticPMID:22681890
fan1Fanconi-associated nuclease Fan1 Synthetic LethalityPMID:24192486
rpl270160S ribosomal protein L27 Negative GeneticPMID:22681890
atg1autophagy and CVT pathway serine/threonine protein kinase Atg1 Positive GeneticPMID:22681890
snz1pyridoxine biosynthesis protein Positive GeneticPMID:22681890
clr4histone H3 lysine methyltransferase Clr4 Negative GeneticPMID:22681890
SPCC594.04csteroid oxidoreductase superfamily protein (predicted) Negative GeneticPMID:22681890
top3DNA topoisomerase III Synthetic RescuePMID:12724426
nup132nucleoporin Nup132 Negative GeneticPMID:22681890
rpa12DNA-directed RNA polymerase complex I subunit Rpa12 Negative GeneticPMID:22681890
SPBC2G5.01ER protein involved in ER-nucleus signaling (predicted) Negative GeneticPMID:22681890
SPBC21B10.08cantibiotic biosynthesis monooxygenase-like domain (predicted) Negative GeneticPMID:22681890
pmt3SUMO Negative GeneticPMID:22681890
SPCC550.07acetamidase (predicted) Negative GeneticPMID:22681890
nup60nucleoporin Nup60 Negative GeneticPMID:22681890
rhp18Rad18 homolog ubiquitin protein ligase E3, Rhp18 Negative GeneticPMID:22681890
rhp16Rad16 homolog ATP-dependent DNA helicase/ ubiquitin protein ligase E3 Rhp16 Synthetic Growth DefectPMID:12675805
crb2DNA repair protein Rad9 homolog, Rhp9 Negative GeneticPMID:22681890
fin1serine/threonine protein kinase, NIMA related Fin1 Negative GeneticPMID:22681890
SPAC6G9.14RNA-binding protein (predicted) Negative GeneticPMID:22681890
ubc13ubiquitin conjugating enzyme Ubc13 Negative GeneticPMID:22681890
rsc4RSC complex subunit Rsc4 Negative GeneticPMID:22681890
arp42SWI/SNF and RSC complex subunit Arp42 Negative GeneticPMID:22681890
srs2ATP-dependent DNA helicase, UvrD subfamily Synthetic RescuePMID:16135800
Synthetic Growth DefectPMID:14993467
Synthetic Rescue
ppt1para-hydroxybenzoate--polyprenyltransferase Ppt1 Phenotypic EnhancementPMID:23365689
SPBC25H2.15SSU-rRNA maturation protein Tsr4 homolog 1 (predicted) Negative GeneticPMID:22681890
pmd1leptomycin efflux transporter Pmd1 Phenotypic EnhancementPMID:23365689
trs130TRAPP complex subunit Trs130 (predicted) Negative GeneticPMID:22681890
rpl35b60S ribosomal protein L35a (predicted) Negative GeneticPMID:22681890
otu2ubiquitin specific cysteine protease, OTU family, Otu2 Negative GeneticPMID:22681890
pdh1DUF1751 family protein Negative GeneticPMID:22681890
sfr1Swi five-dependent recombination repair protein Sfr1 Phenotypic EnhancementPMID:18769921
Phenotypic SuppressionPMID:16080597
upf1ATP-dependent RNA helicase Upf1 Negative GeneticPMID:22681890
rad13DNA repair nuclease Rad13 Negative GeneticPMID:22681890
rad8ubiquitin-protein ligase E3 Rad8 Phenotypic EnhancementPMID:19547744
Negative GeneticPMID:22681890
Synthetic Growth DefectPMID:24875629
fbh1DNA helicase I Synthetic RescuePMID:16135800
rev3DNA polymerase zeta catalytic subunit Rev3 (predicted) Negative GeneticPMID:22681890
cda1chitin deacetylase Cda1 Negative GeneticPMID:22681890
ubp6ubiquitin C-terminal hydrolase Ubp6 Negative GeneticPMID:22681890
swd3WD repeat protein Swd3 Negative GeneticPMID:22681890
pku80Ku domain protein Pku80 Positive GeneticPMID:22681890
egd2nascent polypeptide-associated complex alpha subunit Egd2 Negative GeneticPMID:22681890
atg5autophagy associated protein Atg5 Negative GeneticPMID:22681890
qcr6ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein (predicted) Negative GeneticPMID:22681890
adn2transcription factor (predicted) Negative GeneticPMID:22681890
cgi121EKC/KEOPS complex subunit Cgi121 (predicted) Positive GeneticPMID:22681890
ura1carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1 Negative GeneticPMID:22681890
dmc1RecA family ATPase Dmc1 Phenotypic EnhancementPMID:14668362
rcd1RNA-binding protein, CCR4-NOT complex subunit Rcd1 Negative GeneticPMID:22681890
ssb3DNA replication factor A subunit Ssb3 Synthetic Growth DefectPMID:20885790
slx8SUMO-targeted ubiquitin-protein ligase E3 Slx8 Synthetic LethalityPMID:17762865
SPBC28F2.08cHRD ubiquitin ligase complex subunit (predicted) Negative GeneticPMID:22681890
SPBC9B6.11cCCR4/nocturin family endoribonuclease (predicted) Positive GeneticPMID:22681890
nem1Nem1-Spo7 phosphatase complex catalytic subunit Nem1 (predicted) Negative GeneticPMID:22681890
set9histone lysine H3-K20 methyltransferase Set9 Negative GeneticPMID:22681890
rpl10260S ribosomal protein L10a Negative GeneticPMID:22681890
hrq1RecQ type DNA helicase Hrq1 (predicted) Negative GeneticPMID:22681890
rad3ATR checkpoint kinase Rad3 Synthetic Growth DefectPMID:17178839
Negative GeneticPMID:22681890
ubp2ubiquitin C-terminal hydrolase Ubp2 Negative GeneticPMID:22681890
mto1MT organizer Mto1 Negative GeneticPMID:22681890
dbl2meiotic chromosome segregation protein Dbl2 Positive GeneticPMID:22681890
mug154conserved fungal protein Negative GeneticPMID:22681890
SPAC750.01aldo/keto reductase family protein Negative GeneticPMID:22681890
gpd3glyceraldehyde 3-phosphate dehydrogenase Gpd3 Negative GeneticPMID:22681890
def1RNAPII degradation factor Def1 (predicted) Negative GeneticPMID:22681890
atb2tubulin alpha 2 Negative GeneticPMID:22681890
SPBC17A3.06phosphoprotein phosphatase (predicted) Positive GeneticPMID:22681890
cho2phosphatidylethanolamine N-methyltransferase Cho2 Negative GeneticPMID:22681890
SPCC1393.09cRWD domain protein, implicated in translation Negative GeneticPMID:22681890
rad2FEN-1 endonuclease Rad2 Negative GeneticPMID:22681890
apt1adenine phosphoribosyltransferase (APRT) (predicted) Negative GeneticPMID:22681890
amk2AMP-activated protein kinase beta subunit Amk2 Positive GeneticPMID:22681890
rpl210260S ribosomal protein L21 (predicted) Negative GeneticPMID:22681890
clr2chromatin silencing protein Clr2 Negative GeneticPMID:22681890
klp5kinesin-like protein Klp5 Negative GeneticPMID:22681890
raf1CLRC ubiquitin E3 ligase complex specificiy factor Raf1/Dos1 Negative GeneticPMID:22681890
rrp2ATP-dependent DNA helicase, ubiquitin-protein ligase E3 (predicted) Negative GeneticPMID:22681890
SPBC1198.06cmannan endo-1,6-alpha-mannosidase (predicted) Positive GeneticPMID:22681890
rec11meiotic cohesin complex subunit Rec11 Negative GeneticPMID:22681890
rps40140S ribosomal protein S4 (predicted) Negative GeneticPMID:22681890
SPBPB10D8.06cmembrane transporter (predicted) Negative GeneticPMID:22681890
SPAC5H10.04NADPH dehydrogenase (predicted) Negative GeneticPMID:22681890
External References
Database Identifier Description
NBRP SPAC3C7.03c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC3C7.03c Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPAC3C7.03c BioGRID Interaction Datasets
Expression Viewer SPAC3C7.03c Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPAC3C7.03c Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPAC3C7.03c Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPAC3C7.03c Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPAC3C7.03c Polyadenylation Viewer (Gullerova lab)
pombeTV SPAC3C7.03c Transcriptome Viewer (Bähler Lab)
Cyclebase SPAC3C7.03c Cell Cycle Data
GEO SPAC3C7.03c GEO profiles
PInt SPAC3C7.03c Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPAC3C7.03c Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPAC3C7.03c Fission yeast phenotypic data & analysis
SPD / RIKEN40/40C10Orfeome Localization Data
UniProtKB/SwissProtO14129DNA repair protein rhp55
ModBaseO14129Database of comparative protein structure models
STRINGO14129Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_593604RecA family ATPase Rhp55
RefSeq mRNANM_001019035972h- RecA family ATPase Rhp55 (rhp55), mRNA
European Nucleotide ArchiveAF053410ENA EMBL mapping
European Nucleotide ArchiveCAB16734.1ENA Protein Mapping
UniParcUPI0000133039UniProt Archive

Literature for rad55

Search: Europe PMC or PubMed

Release Version: PomBase:23_47 - 27 Oct 2014