SPAC4F8.11

Synonyms ChromosomeI
ProductWD repeat protein, human WDR24 family Gene Start2661104
Feature Typeprotein coding Gene End2655806
Name Description CDS Start2660584
Characterisation Statusconserved_unknown CDS End2658044

Ensembl Gene Location
spp42 > SPAC4F8.11 < SPNCRNA.326 stg1 mug114 SPNCRNA.200 hxk2
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
126611042655806

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00400 Pfam WD40 repeat 127 163 24.3 107
PF00400 Pfam WD40 repeat 309 336 9 107
PF00400 Pfam WD40 repeat 216 249 39.6 107
PF00400 Pfam WD40 repeat 265 300 12 107
50978 Superfamily 39 347 128.6 127
SM00320 Smart WD40 repeat 210 249 45.4 121
SM00320 Smart WD40 repeat 123 163 34.1 121
SM00320 Smart WD40 repeat 166 206 20.4 121
SM00320 Smart WD40 repeat 254 300 11.5 121
SM00320 Smart WD40 repeat 304 342 11.1 121
SM00320 Smart WD40 repeat 80 120 9.6 121
PS50082 PROSITE WD40 repeat 130 172 11.879 100
PS50082 PROSITE WD40 repeat 217 258 15.454 100
PS50294 PROSITE WD40-repeat-containing domain 86 258 27.579 104
PS00678 scanprosite WD40 repeat 236 250 65
PS00678 scanprosite WD40 repeat 287 301 65


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residue
Temporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Protein Properties

Ave. residue weight 110.20 Da
Charge 5.00
Isoelectric point 7.03
Molecular weight 93.23 kDa
Number of residues 846
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Protein Family

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DescriptionSourceAll Genes
WD repeat proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000190

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAC4F8.11 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC4F8.11 Retrieval of eukaryotic orthologs
BioGrid SPAC4F8.11 BioGRID Interaction Datasets
Bähler Lab SPAC4F8.11 Cell Cycle Expression Profile
Bähler Lab SPAC4F8.11 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC4F8.11 Pheromone response/mating expression profiles
Bähler Lab SPAC4F8.11 Environmental stress expression profiles
Bähler Lab SPAC4F8.11 Bähler Lab Transcriptome Viewer
Cyclebase SPAC4F8.11 Cell Cycle Data
Entrez Gene SPAC4F8.11 Link to Entrez Gene
SPD / RIKEN29/29C10Orfeome Localization Data
UniProtKB/SwissProtO14186Uncharacterized WD repeat-containing protein C4F8.11
ArrayExpressO14186Link to ArrayExpress
RefSeq PeptideNP_593862WD repeat-containing protein
RefSeq mRNANM_001019291972h- WD repeat-containing protein (SPAC4F8.11), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB11058ENA Protein Mapping
UniParcUPI000013AA2CUniProt Archive

Literature for SPAC4F8.11

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Search: UK PMC or PubMed