SPAC5H10.03

Gene Standard NameUnassigned ChromosomeI
Systematic IDSPAC5H10.03 Gene Start149446
Synonyms Gene End152909
Productphosphoglycerate mutase family Gene Length3464
Feature Typeprotein coding CDS Start151913
Name Description CDS End152572
Characterisation Statusconserved_unknown CDS Length660

Ensembl Gene Location
  1. SPAC11D3.17
  2. SPNCRNA.611
  3. SPAC11D3.18c
  4. SPNCRNA.612
  5. SPAC5H10.01
  6. SPAC5H10.02c
  7. SPNCRNA.613
  8. SPAC5H10.03
  9. SPRRNA.10
  10. SPAC5H10.04
  11. SPAC5H10.05c
  12. adh4
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0002060viable vegetative cell populationMicroscopySPAC5H10.03delta (deletion)deletionPMID:20473289
GO Cellular Component

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0005634nucleusIDAPMID:16823372
GO:0005829cytosolIDAPMID:16823372
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1149446152909

References

Region Start End Reference
three_prime_UTR152573152909PMID:21511999
five_prime_UTR149446151912PMID:21511999
three_prime_UTR152573152909PMID:21511999
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF00300 IPR013078 Pfam Histidine phosphatase superfamily, clade-1 8 173 9
SM00855 IPR013078 SMART Histidine phosphatase superfamily, clade-1 8 174 9
PS00175 IPR001345 Prosite Patterns Phosphoglycerate/bisphosphoglycerate mutase, active site 11 20 5
G3DSA:3.40.50.1240 Gene3D 125 216 15
G3DSA:3.40.50.1240 Gene3D 7 86 15
SSF53254 SuperFamily 7 206 15
PTHR23029 hmmpanther 5 219 5

View domain organization at Pfam

Protein Modifications (PSI-MOD)

Term IDTerm NameEvidenceResidueReference
MOD:00696phosphorylated residuePMID:19547744

Protein Properties

Ave. residue weight 112.86 Da
Charge -1.50
Isoelectric point 6.03
Molecular weight 24.72 kDa
Number of residues 219
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide80013.89PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide44174.92PMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide23PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide4.9PMID:23101633
Species Distribution
DescriptionQualifierReference
orthologs cannot be distinguished
conserved in fungi
conserved in eukaryotes
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External References
Database Identifier Description
NBRP SPAC5H10.03 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC5H10.03 Retrieval of eukaryotic orthologs
BioGrid SPAC5H10.03 BioGRID Interaction Datasets
Bähler Lab SPAC5H10.03 Cell Cycle Expression Profile
Bähler Lab SPAC5H10.03 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC5H10.03 Pheromone response/mating expression profiles
Bähler Lab SPAC5H10.03 Environmental stress expression profiles
Bähler Lab SPAC5H10.03 Bähler Lab Transcriptome Viewer
Cyclebase SPAC5H10.03 Cell Cycle Data
PInt SPAC5H10.03 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPAC5H10.03 Entrez Gene
SPD / RIKEN41/41D12Orfeome Localization Data
WikiGene2541759phosphoglycerate mutase family
EntrezGene2541759phosphoglycerate mutase family
UniProtKB/SwissProtQ09676Uncharacterized protein C5H10.03
ModBaseQ09676Database of comparative protein structure models
Pfam Protein DomainsQ09676Pfam Domain Arrangement
RefSeq PeptideNP_592816phosphoglycerate mutase family
RefSeq mRNANM_001018216972h- phosphoglycerate mutase family (SPAC5H10.03), mRNA
European Nucleotide ArchiveCAA89953ENA Protein Mapping
UniParcUPI0000139EF3UniProt Archive

Literature for SPAC5H10.03
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013