SPAC652.01

Gene Standard NameUnassigned ChromosomeI
Systematic IDSPAC652.01 Gene Start3281408
Synonyms Gene End3283071
ProductBC10 family protein Gene Length1664
Feature Typeprotein coding CDS Start3281408
Name Description CDS End3281803
Characterisation Statusconserved_unknown CDS Length396

Ensembl Gene Location
  1. SPAC6G9.14
  2. SPAC6G9.15c
  3. SPAC6G9.16c
  4. SPAPB1E7.01c
  5. SPAC652.01
  6. mcl1
  7. rpc82
  8. SPAPB1E7.04c
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0001491viable vegetative cellMicroscopySPAC652.01delta (deletion)deletionPMID:20473289
GO Cellular Component

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0016021integral to membraneIEAUniProtKB:KW-0812GO_REF:0000037
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
132814083281514
232815843283071

References

Region Start End Reference
three_prime_UTR32818043283071PMID:20118936
three_prime_UTR32818043283071PMID:18641648
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF06726 IPR018015 Pfam Bladder cancer-related BC10 1 55 1
TMhelix TMHMM 7 29 955
PD062192 IPR018015 blastprodom Bladder cancer-related BC10-like 1 59 1

View domain organization at Pfam

Sequence Ontology

Term IDTerm NameReference
SO:0001812transmembrane_helix

Protein Properties

Ave. residue weight 118.35 Da
Charge 6.50
Isoelectric point 9.74
Molecular weight 12.78 kDa
Number of residues 108
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
experimental evidencevegetative growth of a single-celled organismPECO:0000005,
PECO:0000014		population_widePMID:23101633
RNA levelexperimental evidencevegetative growth of a single-celled organismPECO:0000014,
PECO:0000005		population_wide0.7PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.32PMID:23101633
Disease Association
DescriptionQualifierReference
cancer
Species Distribution
DescriptionQualifierReference
no apparent S. cerevisiae ortholog
predominantly single copy (one to one)
conserved in fungi
conserved in eukaryotes
conserved in metazoa
conserved in vertebrates
conserved in eukaryotes only
Manually curated orthologous groups
SpeciesGeneDescription

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External References
Database Identifier Description
NBRP SPAC652.01 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC652.01 Retrieval of eukaryotic orthologs
BioGrid SPAC652.01 BioGRID Interaction Datasets
Bähler Lab SPAC652.01 Cell Cycle Expression Profile
Bähler Lab SPAC652.01 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC652.01 Pheromone response/mating expression profiles
Bähler Lab SPAC652.01 Environmental stress expression profiles
Bähler Lab SPAC652.01 Bähler Lab Transcriptome Viewer
Cyclebase SPAC652.01 Cell Cycle Data
PInt SPAC652.01 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPAC652.01 Entrez Gene
SPD / RIKEN02/02H12Orfeome Localization Data
WikiGene2543566BC10 family protein
EntrezGene2543566BC10 family protein
UniProtKB/SwissProtQ9P6M5Uncharacterized protein C652.01
ModBaseQ9P6M5Database of comparative protein structure models
Pfam Protein DomainsQ9P6M5Pfam Domain Arrangement
RefSeq PeptideNP_594126BC10 family protein
RefSeq PeptideNP_594127conserved fungal family
RefSeq mRNANM_001019550972h- BC10 family protein (SPAC652.01), mRNA
RefSeq mRNANM_001019551972h- conserved fungal family (SPAPB1E7.01c), mRNA
European Nucleotide ArchiveCAB90589ENA Protein Mapping
SPD / RIKEN02/02H12Orfeome Localization Data

Literature for SPAC652.01
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Search: UK PMC or PubMed

Release Version: PomBase:18.34 - 04 Apr 2013