SPAC6F6.13c

Synonyms ChromosomeI
ProductDUF726 family protein Gene Start2758924
Feature Typeprotein coding Gene End2756318
Name Description CDS Start2758834
Characterisation Statusconserved_unknown CDS End2756498

Ensembl Gene Location
arc2 SPAC6F6.11c SPNCRNA.849 SPAC6F6.12 SPNCRNA.850 > SPAC6F6.13c < SPNCRNA.851 SPAC6F6.19 ypt5 tpz1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
127589242756318

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF05277 Pfam Protein of unknown function DUF726 352 692 465.7 2
TMHMM tmhmm Double transmembrane domain 356 378 0.99476 1312
TMHMM tmhmm Double transmembrane domain 380 419 0.73218 1312
TMHMM tmhmm Double transmembrane domain 517 530 0.48779 1312

Protein Properties

Ave. residue weight 110.71 Da
Charge -21.50
Isoelectric point 4.83
Molecular weight 86.13 kDa
Number of residues 778
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005737cytoplasmIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737
GO:0005794Golgi apparatusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005794

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
dsc1ubiquitin-protein ligase E3 (predicted) Negative Genetic
dsc3conserved fungal protein Negative Genetic


External References

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Database Identifier Description
NBRP SPAC6F6.13c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC6F6.13c Retrieval of eukaryotic orthologs
BioGrid SPAC6F6.13c BioGRID Interaction Datasets
Bähler Lab SPAC6F6.13c Cell Cycle Expression Profile
Bähler Lab SPAC6F6.13c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC6F6.13c Pheromone response/mating expression profiles
Bähler Lab SPAC6F6.13c Environmental stress expression profiles
Bähler Lab SPAC6F6.13c Bähler Lab Transcriptome Viewer
Cyclebase SPAC6F6.13c Cell Cycle Data
Entrez Gene SPAC6F6.13c Link to Entrez Gene
SPD / RIKEN46/46G11Orfeome Localization Data
UniProtKB/SwissProtO14244Uncharacterized membrane protein C6F6.13c
ArrayExpressO14244Link to ArrayExpress
RefSeq PeptideNP_593906DUF726 family protein
RefSeq mRNANM_001019336972h- DUF726 family protein (SPAC6F6.13c), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB11736ENA Protein Mapping
UniParcUPI00000696FDUniProt Archive

Literature for SPAC6F6.13c

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Search: UK PMC or PubMed