tpz1 (SPAC6F6.16c)

Synonyms SPAC6F6.18c, mug169 ChromosomeI
ProductTppl homolog Tpz1 Gene Start2765950
Feature Typeprotein coding Gene End2762475
Name DescriptionMeiotically Upregulated Gene CDS Start2765433
Characterisation Statuspublished CDS End2763686

Ensembl Gene Location
SPAC6F6.13c SPNCRNA.851 SPAC6F6.19 ypt5 > tpz1 < rif1 SPNCRNA.852 ppk6
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
127659502765804
227657062765320
327652632765166
427651222764872
527648252764791
627647522764611
727645722762475

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes

Protein Properties

Ave. residue weight 113.55 Da
Charge -19.00
Isoelectric point 4.73
Molecular weight 57.68 kDa
Number of residues 508
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000049inviable
Temporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

 Contact Curators | Back to Top
Biological Process
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0071573telosome assemblyIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0071573

Cellular Component
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000781chromosome, telomeric regionIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000781
GO:0070187telosomeIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0070187

Molecular Function
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005515protein bindingIPI poz1 | pot1 | ccq1Temporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005515

Gene Expression

 Contact Curators | Back to Top
DescriptionSourceAll Genes
expressed during meiosis Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000123

Warning

 Contact Curators | Back to Top
DescriptionSourceAll Genes
gene structure updatedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

 Contact Curators | Back to Top
DescriptionSourceAll Genes
OB fold Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0001718

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

 Contact Curators | Back to Top
SpeciesGeneDescription


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPAC6F6.16c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC6F6.16c Retrieval of eukaryotic orthologs
BioGrid SPAC6F6.16c BioGRID Interaction Datasets
Bähler Lab SPAC6F6.16c Cell Cycle Expression Profile
Bähler Lab SPAC6F6.16c Meiosis/Sporulation Expression Profies
Bähler Lab SPAC6F6.16c Pheromone response/mating expression profiles
Bähler Lab SPAC6F6.16c Environmental stress expression profiles
Bähler Lab SPAC6F6.16c Bähler Lab Transcriptome Viewer
Cyclebase SPAC6F6.16c Cell Cycle Data
Entrez Gene SPAC6F6.16c Link to Entrez Gene
SPD / RIKEN11/11A11Orfeome Localization Data
UniProtKB/SwissProtO14246Protection of telomeres protein tpz1
ArrayExpressO14246Link to ArrayExpress
RefSeq PeptideNP_593908telomere-protecting protein
RefSeq mRNANM_001019338972h- telomere-protecting protein (tpz1), mRNA
European Nucleotide ArchiveAB433170ENA EMBL mapping
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveBAG48200ENA Protein Mapping
European Nucleotide ArchiveCAB11738ENA Protein Mapping
UniParcUPI0001765F0AUniProt Archive

Literature for tpz1

 Contact Curators | Back to Top
Search: UK PMC or PubMed