SPAC823.04

Synonyms ChromosomeI
ProductrRNA processing protein Rrp36, DUF947 family (predicted) Gene Start2587696
Feature Typeprotein coding Gene End2588620
Name Description CDS Start2587729
Characterisation Statusbiological_role_inferred CDS End2588620

Ensembl Gene Location
tif33 SPNCRNA.840 SPAC823.02 ppk15 > SPAC823.04 < tlg2 taf3 SPAC823.07 SPAC823.08c SPAC823.09c
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
125876962587897
225879522588028
325880312588143
425881822588620

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF06102 Pfam Protein of unknown function DUF947 120 251 119.1 1

Protein Properties

Ave. residue weight 118.27 Da
Charge 9.00
Isoelectric point 9.65
Molecular weight 31.34 kDa
Number of residues 265
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000269sensitive to microtubule depolymerizing drugsTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000269
FYPO:0000085sensitive to camptothecinTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000085
FYPO:0000266sensitive to DNA damaging agentsTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000266
FYPO:0000091sensitive to thiabendazoleTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000091
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000462maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)ISS SGD:S000005813GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000462
GO:0000469cleavage involved in rRNA processingISS SGD:S000005813GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000469
GO:0042274ribosomal small subunit biogenesisISS SGD:S000005813GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0042274

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005730nucleolusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005730
GO:003068690S preribosomeISS SGD:S000005813GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030686

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAC823.04 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC823.04 Retrieval of eukaryotic orthologs
BioGrid SPAC823.04 BioGRID Interaction Datasets
Bähler Lab SPAC823.04 Cell Cycle Expression Profile
Bähler Lab SPAC823.04 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC823.04 Pheromone response/mating expression profiles
Bähler Lab SPAC823.04 Environmental stress expression profiles
Bähler Lab SPAC823.04 Bähler Lab Transcriptome Viewer
Cyclebase SPAC823.04 Cell Cycle Data
Entrez Gene SPAC823.04 Link to Entrez Gene
SPD / RIKEN09/09D04Orfeome Localization Data
UniParcUPI000228F372UniProt Archive

Literature for SPAC823.04

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Search: UK PMC or PubMed