tim14 (SPAC824.06)


Gene Standard Nametim14 Characterisation Statusbiological_role_inferred
Systematic IDSPAC824.06 Feature Typeprotein coding
Synonyms Name Description
ProductTIM23 translocase complex subunit Tim14 (predicted) Product Size140aa, 15.27 kDa
Genomic Location Chromosome I, 1694906-1696484 (1579nt); CDS:1695102-1695624 (523nt)

Ensembl Gene Location
GO Molecular Function
Term NameCount
ATPase activator activity3
Annotation ExtensionEvidenceWith/FromReference
Hsp70 protein binding26
Annotation ExtensionEvidenceWith/FromReference
P-P-bond-hydrolysis-driven protein transmembrane transporter activity11
Annotation ExtensionEvidenceWith/FromReference
unfolded protein binding42
Annotation ExtensionEvidenceWith/FromReference
GO Biological Process
Term NameCount
positive regulation of ATPase activity3
Annotation ExtensionEvidenceWith/FromReference
protein folding106
Annotation ExtensionEvidenceWith/FromReference
protein import into mitochondrial matrix17
Annotation ExtensionEvidenceWith/FromReference
GO Cellular Component
Term NameCount
integral component of membrane1018
Annotation ExtensionEvidenceWith/FromReference
mitochondrion758
Annotation ExtensionEvidenceWith/FromReference
presequence translocase-associated import motor6
Annotation ExtensionEvidenceWith/FromReference
Fission Yeast Phenotype Ontology
Gene Deletion Viability: Inviable

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002061inviable vegetative cell populationMicroscopytim14ΔNullPECO:0000005, PECO:0000137PMID:236978061338

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002111inviable tapered vegetative cell134
penetrance FYPO_EXT:0000001Microscopytim14ΔNullPECO:0000005, PECO:0000137PMID:23697806
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
116949061695104
216951521695199
316952531696484

UTRs

Region Coordinates Reference
five_prime_UTR1694906..1695101PMID:21511999
three_prime_UTR1695625..1696484PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00226 Pfam IPR001623 DnaJ domain 54 108 24
SM00271 SMART IPR001623 DnaJ domain 50 105 23
PS50076 Prosite Profiles IPR001623 DnaJ domain 51 113 24
PTHR12763 HMMPANTHER 1 139 1
PTHR12763:SF5 HMMPANTHER IPR027134 Mitochondrial import inner membrane translocase subunit Tim14, fungal 1 139 1
1.10.287.110 Gene3D IPR001623 DnaJ domain 41 103 26
SSF46565 SuperFamily IPR001623 DnaJ domain 41 103 25
SignalP-noTM signalp 1 17 212

View domain organization at Pfam

Protein Properties

Ave. residue weight 109.08 Da
Charge 15.00
Isoelectric point 11.25
Molecular weight 15.27 kDa
Number of residues 140
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
9960during GO:0000080PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
7595during GO:0000084PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
7718during GO:0000085PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
11813during GO:0000087PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
3827.42during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
7284during GO:0072690PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
1804.64during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
1.9during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
0.5during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
Species Distribution
DescriptionQualifierReferenceCount
predominantly single copy (one to one)3092
conserved in fungi4600
conserved in eukaryotes4514
conserved in metazoa3425
conserved in vertebrates3400
conserved in eukaryotes only2497
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


External References
Database Identifier Description
NBRP SPAC824.06 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC824.06 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPAC824.06 BioGRID Interaction Datasets
Expression Viewer SPAC824.06 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPAC824.06 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPAC824.06 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPAC824.06 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPAC824.06 Polyadenylation Viewer (Gullerova lab)
pombeTV SPAC824.06 Transcriptome Viewer (Bähler Lab)
Cyclebase SPAC824.06 Cell Cycle Data
GEO SPAC824.06 GEO profiles
PInt SPAC824.06 Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPAC824.06 Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPAC824.06 Fission yeast phenotypic data & analysis
SPD / RIKEN05/05C01Orfeome Localization Data
UniProtKB/SwissProtQ9UT37Mitochondrial import inner membrane translocase subunit tim14
ModBaseQ9UT37Database of comparative protein structure models
STRINGQ9UT37Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_593445TIM23 translocase complex subunit Tim14 (predicted)
RefSeq mRNANM_001018878972h- TIM23 translocase complex subunit Tim14 (predicted) (tim14), mRNA
European Nucleotide ArchiveCAB57336.1ENA Protein Mapping
UniParcUPI000006C54BUniProt Archive

Literature for tim14

Search: Europe PMC or PubMed

Release Version: PomBase:23_47 - 27 Oct 2014