SPAC8C9.19

Gene Standard NameUnassigned ChromosomeI
Systematic IDSPAC8C9.19 Gene Start3660430
Synonyms Gene End3660717
Productconserved fungal protein Gene Length288
Feature Typeprotein coding CDS Start3660430
Name Description CDS End3660717
Characterisation Statusconserved_unknown CDS Length288

Ensembl Gene Location
  1. ppr4
  2. SPAC8C9.07
  3. rps5
  4. mug129
  5. rrp14
  6. SPAC8C9.11
  7. SPNCRNA.228
  8. SPAC8C9.19
  9. SPAC8C9.12c
  10. prr1
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0002060viable vegetative cell populationMicroscopySPAC8C9.19delta (deletion)deletionPMID:20473289
GO Cellular Component

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0016021integral to membraneIEAUniProtKB:KW-0812GO_REF:0000037
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
136604303660438
236604913660556
336606073660717
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
TMhelix TMHMM 21 43 955

View domain organization at Pfam

Protein Properties

Ave. residue weight 116.43 Da
Charge 6.00
Isoelectric point 10.70
Molecular weight 7.10 kDa
Number of residues 61
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide2168.98PMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide0.67PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.33PMID:23101633
Species Distribution
DescriptionQualifierReference
predominantly single copy (one to one)
conserved in fungi only
conserved in fungi
conserved in eukaryotes
Manually curated orthologous groups
SpeciesGeneDescription

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External References
Database Identifier Description
NBRP SPAC8C9.19 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAC8C9.19 Retrieval of eukaryotic orthologs
BioGrid SPAC8C9.19 BioGRID Interaction Datasets
Bähler Lab SPAC8C9.19 Cell Cycle Expression Profile
Bähler Lab SPAC8C9.19 Meiosis/Sporulation Expression Profies
Bähler Lab SPAC8C9.19 Pheromone response/mating expression profiles
Bähler Lab SPAC8C9.19 Environmental stress expression profiles
Bähler Lab SPAC8C9.19 Bähler Lab Transcriptome Viewer
Cyclebase SPAC8C9.19 Cell Cycle Data
PInt SPAC8C9.19 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPAC8C9.19 Entrez Gene
SPD / RIKEN52/52E07Orfeome Localization Data
WikiGene5802920conserved fungal protein
EntrezGene5802920conserved fungal protein
UniProtKB/SwissProtQ4ZGE1UPF0618 protein C8C9.19
ModBaseQ4ZGE1Database of comparative protein structure models
Pfam Protein DomainsQ4ZGE1Pfam Domain Arrangement
RefSeq_mRNA_predictedXM_001713036972h- conserved fungal protein (SPAC8C9.19), mRNA
RefSeq_peptide_predictedXP_001713088conserved fungal protein
European Nucleotide ArchiveCAI94397ENA Protein Mapping
UniParcUPI0001B06281UniProt Archive

Literature for SPAC8C9.19
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013