mdb1 (SPACUNK4.14)

Synonyms ChromosomeI
ProductBRCT domain protein Gene Start2885542
Feature Typeprotein coding Gene End2882793
Name Description CDS Start2885220
Characterisation Statusconserved_unknown CDS End2883184

Ensembl Gene Location
mug153 SPACUNK4.16c SPACUNK4.15 > mdb1 < SPACUNK4.13c prl56 mug138 SPACUNK4.11c SPACUNK4.10
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
128855422884987
228849322884840
328847832883542
428834892882793

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00533 Pfam BRCT domain 400 455 38.6 8
52113 Superfamily 342 486 67.3 12
SM00292 Smart BRCT domain 380 458 54.3 12
PS50172 PROSITE BRCT domain 400 468 15.064 13


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residueTemporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Protein Properties

Ave. residue weight 112.50 Da
Charge -23.00
Isoelectric point 4.71
Molecular weight 70.20 kDa
Number of residues 624
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

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DescriptionSourceAll Genes
BRCT domainTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000443

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
no apparent orthologs, S. pombe variantTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000292
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094


External References

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Database Identifier Description
NBRP SPACUNK4.14 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPACUNK4.14 Retrieval of eukaryotic orthologs
BioGrid SPACUNK4.14 BioGRID Interaction Datasets
Bähler Lab SPACUNK4.14 Cell Cycle Expression Profile
Bähler Lab SPACUNK4.14 Meiosis/Sporulation Expression Profies
Bähler Lab SPACUNK4.14 Pheromone response/mating expression profiles
Bähler Lab SPACUNK4.14 Environmental stress expression profiles
Bähler Lab SPACUNK4.14 Bähler Lab Transcriptome Viewer
Cyclebase SPACUNK4.14 Cell Cycle Data
Entrez Gene SPACUNK4.14 Link to Entrez Gene
SPD / RIKEN35/35A01Orfeome Localization Data
UniProtKB/SwissProtO14079Uncharacterized protein UNK4.14
ArrayExpressO14079Link to ArrayExpress
RefSeq PeptideNP_593964BRCT domain protein
RefSeq mRNANM_001019391972h- BRCT domain protein (mdb1), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAA20144ENA Protein Mapping
UniParcUPI000228F483UniProt Archive

Literature for mdb1

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Search: UK PMC or PubMed