SPAP27G11.12

Synonyms ChromosomeI
Producthuman C17orf28 ortholog 1 Gene Start1632068
Feature Typeprotein coding Gene End1634832
Name Description CDS Start1632068
Characterisation Statusconserved_unknown CDS End1634742

Ensembl Gene Location
nup184 SPAP27G11.11c SPNCRNA.750 SPAP27G11.16 > SPAP27G11.12 < nop10 SPAP27G11.14c slx1 erg8
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
116320681632087
216321671632209
316323621632394
416324451634832

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF12722 Pfam 1 777 637.6 3
TMHMM tmhmm Double transmembrane domain 226 235 0.53495 1312
TMHMM tmhmm Double transmembrane domain 256 272 0.50766 1312
TMHMM tmhmm Double transmembrane domain 342 355 0.4768 1312

Protein Properties

Ave. residue weight 116.07 Da
Charge 6.50
Isoelectric point 7.06
Molecular weight 92.50 kDa
Number of residues 797
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Disease Association

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DescriptionSourceAll Genes
cancerTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000239

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPAP27G11.12 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPAP27G11.12 Retrieval of eukaryotic orthologs
BioGrid SPAP27G11.12 BioGRID Interaction Datasets
Bähler Lab SPAP27G11.12 Cell Cycle Expression Profile
Bähler Lab SPAP27G11.12 Meiosis/Sporulation Expression Profies
Bähler Lab SPAP27G11.12 Pheromone response/mating expression profiles
Bähler Lab SPAP27G11.12 Environmental stress expression profiles
Bähler Lab SPAP27G11.12 Bähler Lab Transcriptome Viewer
Cyclebase SPAP27G11.12 Cell Cycle Data
Entrez Gene SPAP27G11.12 Link to Entrez Gene
UniProtKB/SwissProtQ9P7M6UPF0663 protein P27G11.12
ArrayExpressQ9P7M6Link to ArrayExpress
RefSeq PeptideNP_593417hypothetical protein SPAP27G11.12
RefSeq mRNANM_001018850972h- hypothetical protein (SPAP27G11.12), mRNA
European Nucleotide ArchiveCU329670ENA EMBL mapping
European Nucleotide ArchiveCAB76033ENA Protein Mapping
UniParcUPI0000069868UniProt Archive

Literature for SPAP27G11.12

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Search: UK PMC or PubMed