SPATRNAMET.01

Gene Standard NameUnassigned ChromosomeI
Systematic IDSPATRNAMET.01 Gene Start1096474
Synonyms Gene End1096545
ProducttRNA Methionine Gene Length72
Feature TypetRNA CDS Start
Name Description CDS End
Characterisation Status CDS Length

Ensembl Gene Location
  1. lag1
  2. SPAC1A6.10
  3. SPAC30D11.14c
  4. hus5
  5. SPATRNASER.01
  6. SPATRNAMET.01
  7. rpl3802
  8. SPAC30D11.11
  9. rad22
  10. SPNCRNA.711
  11. SPNCRNA.712
  12. cwf19
GO Molecular Function

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0033425CAU codon-amino acid adaptor activityRCAGO_REF:0000001
GO Biological Process

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0002181cytoplasmic translationNASGO_REF:0000051
GO Cellular Component

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0005737cytoplasmRCAGO_REF:0000001
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
110964741096545
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000005,
PECO:0000014		population_widePMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide200PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide9PMID:23101633
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External References
Database Identifier Description
NBRP SPATRNAMET.01 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPATRNAMET.01 Retrieval of eukaryotic orthologs
BioGrid SPATRNAMET.01 BioGRID Interaction Datasets
Bähler Lab SPATRNAMET.01 Cell Cycle Expression Profile
Bähler Lab SPATRNAMET.01 Meiosis/Sporulation Expression Profies
Bähler Lab SPATRNAMET.01 Pheromone response/mating expression profiles
Bähler Lab SPATRNAMET.01 Environmental stress expression profiles
Bähler Lab SPATRNAMET.01 Bähler Lab Transcriptome Viewer
Cyclebase SPATRNAMET.01 Cell Cycle Data
PInt SPATRNAMET.01 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPATRNAMET.01 Entrez Gene
European Nucleotide ArchiveV01360ENA EMBL mapping

Literature for SPATRNAMET.01
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013