SPBC119.18

Gene Standard NameUnassigned ChromosomeII
Systematic IDSPBC119.18 Gene Start743879
Synonyms Gene End744637
Productmitochondrial distribution and morphology protein Mdm35 (predicted) Gene Length759
Feature Typeprotein coding CDS Start744069
Name Description CDS End744340
Characterisation Statusbiological_role_inferred CDS Length272

Ensembl Gene Location
  1. asn1
  2. pac1
  3. SPNCRNA.1383
  4. rud3
  5. prp31
  6. SPBC119.18
  7. SPBTRNASER.05
  8. SPBC119.16c
  9. rti1
  10. SPBC119.15
  11. SPBC119.17
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0001489inviable vegetative cellMicroscopySPBC119.18delta (deletion)deletionPMID:20473289
GO Biological Process

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0033108mitochondrial respiratory chain complex assemblyISOSGD:S000007243GO_REF:0000024
GO Cellular Component

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Term IDTerm NameEvidenceWith/FromReference
GO:0005634nucleusIDAPMID:16823372
GO:0005739mitochondrionISOSGD:S000007243GO_REF:0000024
GO:0005829cytosolIDAPMID:16823372
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1743879744107
2744170744637

References

Region Start End Reference
three_prime_UTR744341744637PMID:21511999
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF05254 IPR007918 Pfam Mitochondrial distribution/morphology family 35/apoptosis 1 68 1
PTHR21329 hmmpanther 1 62 2

View domain organization at Pfam

Protein Properties

Ave. residue weight 115.44 Da
Charge 0.50
Isoelectric point 7.13
Molecular weight 7.97 kDa
Number of residues 69
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide3456.49PMID:23101633
experimental evidencevegetative growth of a single-celled organismPECO:0000014,
PECO:0000005		population_wide5467.52PMID:23101633
RNA levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.76PMID:23101633
experimental evidencevegetative growth of a single-celled organismPECO:0000014,
PECO:0000005		population_wide3.8PMID:23101633
Species Distribution
DescriptionQualifierReference
predominantly single copy (one to one)
conserved in fungi
conserved in eukaryotes
conserved in metazoa
conserved in vertebrates
conserved in eukaryotes only
Manually curated orthologous groups
SpeciesGeneDescription

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External References
Database Identifier Description
NBRP SPBC119.18 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC119.18 Retrieval of eukaryotic orthologs
BioGrid SPBC119.18 BioGRID Interaction Datasets
Bähler Lab SPBC119.18 Cell Cycle Expression Profile
Bähler Lab SPBC119.18 Meiosis/Sporulation Expression Profies
Bähler Lab SPBC119.18 Pheromone response/mating expression profiles
Bähler Lab SPBC119.18 Environmental stress expression profiles
Bähler Lab SPBC119.18 Bähler Lab Transcriptome Viewer
Cyclebase SPBC119.18 Cell Cycle Data
PInt SPBC119.18 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPBC119.18 Entrez Gene
SPD / RIKEN51/51F07Orfeome Localization Data
WikiGene2540098mitochondrial distribution and morphology protein Mdm35 (predicted)
EntrezGene2540098mitochondrial distribution and morphology protein Mdm35 (predicted)
UniProtKB/SwissProtQ96VG1Uncharacterized protein C119.18
ModBaseQ96VG1Database of comparative protein structure models
Pfam Protein DomainsQ96VG1Pfam Domain Arrangement
RefSeq PeptideNP_595295mitochondrial distribution and morphology protein Mdm35 (predicted)
RefSeq mRNANM_001021202972h- mitochondrial distribution and morphology protein Mdm35 (predicted) (SPBC119.18), mRNA
European Nucleotide ArchiveCAC51385ENA Protein Mapping
SPD / RIKEN51/51F07Orfeome Localization Data

Literature for SPBC119.18
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Search: UK PMC or PubMed

Release Version: PomBase:18.34 - 04 Apr 2013