mug96 (SPBC1271.06c)

Gene Standard Namemug96 ChromosomeII
Systematic IDSPBC1271.06c Gene Start359903
Synonyms Gene End360366
Productsequence orphan Gene Length464
Feature Typeprotein coding CDS Start359903
Name DescriptionMeiotically Upregulated Gene CDS End360343
Characterisation Statussequence_orphan CDS Length441

Ensembl Gene Location
  1. SPNCRNA.1343
  2. SPBTRNAGLN.04
  3. SPBC1271.08c
  4. SPNCRNA.1344
  5. SPBC1271.07c
  6. SPNCRNA.1345
  7. SPNCRNA.1346
  8. mug96
  9. SPNCRNA.304
  10. SPNCRNA.1348
  11. SPBC1271.05c
  12. SPBC1271.04c
  13. SPBC1271.03c
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0001491viable vegetative cellmug96delta (deletion)deletionPMID:12618370
Microscopymug96delta (deletion)deletionPMID:20473289
GO Cellular Component

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0005737cytoplasmIDAPMID:16823372
GO:0016021integral to membraneIEAUniProtKB:KW-0812GO_REF:0000037
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1359903360366

References

Region Start End Reference
three_prime_UTR360344360366PMID:21511999
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
TMhelix TMHMM 85 104 955

View domain organization at Pfam

Protein Properties

Ave. residue weight 118.44 Da
Charge 12.00
Isoelectric point 10.27
Molecular weight 17.29 kDa
Number of residues 146
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
expressed during meiosis PMID:16303567
protein levelexperimental evidencevegetative growth of a single-celled organismPECO:0000005,
PECO:0000014		population_widePMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
RNA levelexperimental evidencevegetative growth of a single-celled organismPECO:0000005,
PECO:0000014		population_widePMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
Species Distribution
DescriptionQualifierReference
identified in S. pombe only
sequence orphan
sequence orphan, uncharacterised
no apparent orthologs
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Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
hus1checkpoint clamp complex protein Hus1 Positive GeneticPMID:22681890
erg5C-22 sterol desaturase Erg5 Positive GeneticPMID:22681890
ubp4ubiquitin C-terminal hydrolase Ubp4 Negative GeneticPMID:22681890
ssp2serine/threonine protein kinase Ssp2 Negative GeneticPMID:22681890
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External References
Database Identifier Description
NBRP SPBC1271.06c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC1271.06c Retrieval of eukaryotic orthologs
BioGrid SPBC1271.06c BioGRID Interaction Datasets
Bähler Lab SPBC1271.06c Cell Cycle Expression Profile
Bähler Lab SPBC1271.06c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC1271.06c Pheromone response/mating expression profiles
Bähler Lab SPBC1271.06c Environmental stress expression profiles
Bähler Lab SPBC1271.06c Bähler Lab Transcriptome Viewer
Cyclebase SPBC1271.06c Cell Cycle Data
PInt SPBC1271.06c Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPBC1271.06c Entrez Gene
WikiGene2541409sequence orphan
Uniprot_genenameMUG96
EntrezGene2541409sequence orphan
SPD / RIKEN03/03G10Orfeome Localization Data
UniProtKB/SwissProtO94339Meiotically up-regulated gene 96 protein
ModBaseO94339Database of comparative protein structure models
Pfam Protein DomainsO94339Pfam Domain Arrangement
RefSeq PeptideNP_595144sequence orphan
RefSeq mRNANM_001021052972h- sequence orphan (mug96), mRNA
European Nucleotide ArchiveCAA22196ENA Protein Mapping
SPD / RIKEN03/03G10Orfeome Localization Data

Literature for mug96
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Search: UK PMC or PubMed

Release Version: PomBase:18.34 - 04 Apr 2013