ght7 (SPBC1348.14c)


Gene Standard Nameght7 Characterisation Statusbiological_role_inferred
Systematic IDSPBC1348.14c Feature Typeprotein coding
SynonymsSPAC1348.14c, SPAP8B6.01c, SPAPB8B6.01c, SPBPB8B6.01c Name Description
Producthexose transporter Ght7 (predicted) Product Size518aa, 57.92 kDa
Genomic Location Chromosome II, 40277-38514 (1764nt); CDS:40143-38587 (1557nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0015149hexose transmembrane transporter activityNASGO_REF:00000016
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0035428hexose transmembrane transportNASGO_REF:00000018
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0005737cytoplasmIDAPMID:168233724201
GO:0005783endoplasmic reticulumIDAPMID:16823372594
GO:0016021integral component of membraneIEAUniProtKB-KW:KW-0812GO_REF:00000371017
GO:0005886plasma membraneNASGO_REF:0000001242
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002060viable vegetative cell populationMicroscopyght7ΔNullPMID:204732893760
Microscopyght7ΔNullPECO:0000005, PECO:0000137PMID:23697806

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002177viable vegetative cell with normal cell morphology3086
penetrance FYPO_EXT:0000001Microscopyght7ΔNullPECO:0000005, PECO:0000137PMID:23697806
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
14027738514

UTRs

Region Coordinates Reference
three_prime_UTR38586..38514PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00083 Pfam IPR005828 General substrate transporter 12 437 15
TMhelix TMHMM 55 75 959
TMhelix TMHMM 274 296 959
TMhelix TMHMM 373 395 959
TMhelix TMHMM 115 137 959
TMhelix TMHMM 405 422 959
TMhelix TMHMM 147 169 959
TMhelix TMHMM 237 259 959
TMhelix TMHMM 26 48 959
TMhelix TMHMM 301 323 959
TMhelix TMHMM 80 102 959
TMhelix TMHMM 338 360 959
PS50850 Prosite Profiles IPR020846 Major facilitator superfamily domain 1 426 55
PS00216 Prosite Patterns IPR005829 Sugar transporter, conserved site 288 305 15
PTHR24063 HMMPANTHER 1 459 11
PTHR24063:SF337 HMMPANTHER 1 459 8
1.20.1250.20 Gene3D 233 432 69
1.20.1250.20 Gene3D 15 174 69
SSF103473 SuperFamily IPR016196 Major facilitator superfamily domain, general substrate transporter 14 434 76
PR00171 PRINTS IPR003663 Sugar/inositol transporter 246 256 10
PR00171 PRINTS IPR003663 Sugar/inositol transporter 82 101 10
PR00171 PRINTS IPR003663 Sugar/inositol transporter 362 374 10
PR00171 PRINTS IPR003663 Sugar/inositol transporter 339 360 10
TIGR00879 tigrfam IPR003663 Sugar/inositol transporter 14 433 10

View domain organization at Pfam

Protein Properties

Ave. residue weight 111.82 Da
Charge 6.50
Isoelectric point 7.90
Molecular weight 57.92 kDa
Number of residues 518
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
NDduring GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
NDduring cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
0.012during GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
0.022during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633
Species Distribution
DescriptionQualifierReferenceCount
conserved in fungi4569
conserved in eukaryotes4482
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
eso1sister chromatid cohesion protein/DNA polymerase eta Eso1 fusion protein Negative GeneticPMID:23050226
External References
Database Identifier Description
NBRP SPBC1348.14c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC1348.14c Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPBC1348.14c BioGRID Interaction Datasets
Expression Viewer SPBC1348.14c Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPBC1348.14c Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPBC1348.14c Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPBC1348.14c Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPBC1348.14c Polyadenylation Viewer (Gullerova lab)
pombeTV SPBC1348.14c Transcriptome Viewer (Bähler Lab)
Cyclebase SPBC1348.14c Cell Cycle Data
GEO SPBC1348.14c GEO profiles
PInt SPBC1348.14c Protein-Protein Interaction Predictor (Bähler Lab)
WikiGene2541736hexose transporter Ght7
EntrezGene2541736hexose transporter Ght7
SPD / RIKEN50/50H01Orfeome Localization Data
UniProtKB/SwissProtQ8TFG1Probable high-affinity hexose transporter ght7
ModBaseQ8TFG1Database of comparative protein structure models
STRINGQ8TFG1Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_001018762hexose transporter Ght7
RefSeq mRNANM_001020937972h- hexose transporter Ght7 (ght7), mRNA
European Nucleotide ArchiveCAD27907ENA Protein Mapping
European Nucleotide ArchiveCAD27907.1ENA Protein Mapping
UniParcUPI000006CC7CUniProt Archive

Literature for ght7

Search: Europe PMC or PubMed

Release Version: PomBase:22_44 - 08 Jul 2014