pet117 (SPBC1604.25)

Synonyms SPNG1899, SPNCRNA.430 ChromosomeII
ProductPet117 cytochrome c oxidase assemby protein (predicted) Gene Start3892062
Feature Typeprotein coding Gene End3892917
Name Description CDS Start3892255
Characterisation Statusbiological_role_inferred CDS End3892574

Ensembl Gene Location
gfh1 ubc8 SPBC211.08c ptr3 > pet117 < SPNCRNA.1646 tea2 SPBC1604.19c SPBC1604.18c tti2
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
138920623892350
238924043892917

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
TMHMM tmhmm Double transmembrane domain 5 25 0.82859 1312

Protein Properties

Ave. residue weight 117.88 Da
Charge 1.50
Isoelectric point 8.46
Molecular weight 10.37 kDa
Number of residues 88
Sequence
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Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0008535respiratory chain complex IV assemblyISS SGD:S000000860GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0008535

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005739mitochondrionISS SGD:S000000860GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005739

Warning

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DescriptionSourceAll Genes
previously annotated as ncRNATemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000406
new gene Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000082

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in Fungi onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000056
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPBC1604.25 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC1604.25 Retrieval of eukaryotic orthologs
BioGrid SPBC1604.25 BioGRID Interaction Datasets
Bähler Lab SPBC1604.25 Cell Cycle Expression Profile
Bähler Lab SPBC1604.25 Meiosis/Sporulation Expression Profies
Bähler Lab SPBC1604.25 Pheromone response/mating expression profiles
Bähler Lab SPBC1604.25 Environmental stress expression profiles
Bähler Lab SPBC1604.25 Bähler Lab Transcriptome Viewer
Cyclebase SPBC1604.25 Cell Cycle Data
Entrez Gene SPBC1604.25 Link to Entrez Gene
UniProtKB/SwissProtC6Y4C1Protein pet117, mitochondrial
ArrayExpressC6Y4C1Link to ArrayExpress
RefSeq_mRNA_predictedXM_002788896972h- Pet117 cytochrome c oxidase assemby protein (predicted) (pet117), mRNA
RefSeq_peptide_predictedXP_002788942Pet117 cytochrome c oxidase assemby protein (predicted)
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCBA11510ENA Protein Mapping
UniParcUPI0001B0624CUniProt Archive

Literature for pet117

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Search: UK PMC or PubMed