SPBC16A3.02c

Synonyms ChromosomeII
Productmitochondrial conserved protein (predicted) Gene Start4296979
Feature Typeprotein coding Gene End4298874
Name Description CDS Start4297584
Characterisation Statusconserved_unknown CDS End4298627

Ensembl Gene Location
rae1 rsm25 ppr7 > SPBC16A3.02c < spn3 SPBC543.02c pku80 SPBC543.04
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
142969794298874

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00107 Pfam Alcohol dehydrogenase, C-terminal 177 265 66.1 12
PF08240 Pfam Alcohol dehydrogenase GroES-like 45 111 32.2 9
50129 Superfamily 12 170 87.8 13
51735 Superfamily 138 341 111.3 88


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residueTemporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Protein Properties

Ave. residue weight 110.05 Da
Charge 3.00
Isoelectric point 7.20
Molecular weight 38.19 kDa
Number of residues 347
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005737cytoplasmIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737
GO:0005739mitochondrionISS SGD:S000004760GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005739
GO:0005783endoplasmic reticulumIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005783
GO:0005794Golgi apparatusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005794

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0004024alcohol dehydrogenase activity, zinc-dependentISS PFAM:PF00107GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0004024
GO:0008270zinc ion bindingIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0008270

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
dsc4conserved fungal protein Positive Genetic


External References

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Database Identifier Description
NBRP SPBC16A3.02c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC16A3.02c Retrieval of eukaryotic orthologs
BioGrid SPBC16A3.02c BioGRID Interaction Datasets
Bähler Lab SPBC16A3.02c Cell Cycle Expression Profile
Bähler Lab SPBC16A3.02c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC16A3.02c Pheromone response/mating expression profiles
Bähler Lab SPBC16A3.02c Environmental stress expression profiles
Bähler Lab SPBC16A3.02c Bähler Lab Transcriptome Viewer
Cyclebase SPBC16A3.02c Cell Cycle Data
Entrez Gene SPBC16A3.02c Link to Entrez Gene
SPD / RIKEN15/15H01Orfeome Localization Data
UniProtKB/SwissProtO42909Zinc-type alcohol dehydrogenase-like protein C16A3.02c
ArrayExpressO42909Link to ArrayExpress
RefSeq PeptideNP_596787mitochondrial peptidase (predicted)
RefSeq mRNANM_001023808972h- mitochondrial peptidase (predicted) (SPBC16A3.02c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAA16853ENA Protein Mapping
UniParcUPI000006AC71UniProt Archive

Literature for SPBC16A3.02c

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Search: UK PMC or PubMed