lsd90 (SPBC16E9.16c)

Synonyms ChromosomeII
ProductLsd90 protein Gene Start1950255
Feature Typeprotein coding Gene End1947985
Name DescriptionLarge and Small Daughter CDS Start1950255
Characterisation Statuspublished CDS End1947985

Ensembl Gene Location
SPNCRNA.1479 ksp1 zrg17 SPBC16E9.15 > lsd90 < SPNCRNA.1480 SPBC16E9.20 SPNCRNA.1481 SPNCRNA.571 rem1 psd1
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
119502551950053
219500501948955
319489531947985

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes

Protein Properties

Ave. residue weight 108.91 Da
Charge 4.00
Isoelectric point 7.17
Molecular weight 82.23 kDa
Number of residues 755
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

 Contact Curators | Back to Top
Biological Process
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0042759long-chain fatty acid biosynthetic processIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0042759

Warning

 Contact Curators | Back to Top
DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
sequence orphan, characterisedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000493
no apparent orthologsTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000078
identified in S. pombe onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000067
sequence orphanTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000076


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPBC16E9.16c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC16E9.16c Retrieval of eukaryotic orthologs
BioGrid SPBC16E9.16c BioGRID Interaction Datasets
Bähler Lab SPBC16E9.16c Cell Cycle Expression Profile
Bähler Lab SPBC16E9.16c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC16E9.16c Pheromone response/mating expression profiles
Bähler Lab SPBC16E9.16c Environmental stress expression profiles
Bähler Lab SPBC16E9.16c Bähler Lab Transcriptome Viewer
Cyclebase SPBC16E9.16c Cell Cycle Data
Entrez Gene SPBC16E9.16c Link to Entrez Gene
SPD / RIKEN52/52C11Orfeome Localization Data
RefSeq_mRNA_predictedXM_001713081972h- Lsd90 protein (lsd90), mRNA
RefSeq_peptide_predictedXP_001713133Lsd90 protein
Uniprot/SPTREMBLA9ZLL8Lsd p90
European Nucleotide ArchiveAB012755ENA EMBL mapping
European Nucleotide ArchiveBAF98920ENA Protein Mapping
UniParcUPI0001B06249UniProt Archive

Literature for lsd90

 Contact Curators | Back to Top
Search: UK PMC or PubMed